Dokdonia sp. MED134: MED134_03844
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Entry
MED134_03844 CDS
T03275
Symbol
msbA
Name
(GenBank) lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
dok
Dokdonia sp. MED134
Pathway
dok02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dok00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MED134_03844 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dok02000
]
MED134_03844 (msbA)
Enzymes [BR:
dok01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
MED134_03844 (msbA)
Transporters [BR:
dok02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
MED134_03844 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
Zeta_toxin
RsgA_GTPase
AAA_22
nSTAND3
AAA
APS_kinase
AAA_29
MMR_HSR1
PPV_E1_C
AAA_18
AAA_15
AAA_25
AAA_16
DEAD
FeoB_N
AAA_30
8xMP
AAA_33
AAA_5
AAA_23
Motif
Other DBs
NCBI-ProteinID:
EAQ38414
LinkDB
All DBs
Position
791914..793740
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AA seq
608 aa
AA seq
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MEYFKKIISYAMPYKGYGILNIICNVFYALFSTLGFVALIPMLQVLFDKTKTVTEKPEWN
GLLKAKDFMEDSLGYYVTEIAKDDKVQALTLMIGFVIAVFLLKNLFGYLAMYFITFLRNG
VLMDIRNAMYEKIVSLPVAYFTEKRKGDTIARVTSDVQEVQHSFLSILELIVREPLTITF
ALGTMFLLSPQLAVFVLTFIPIMGFVISLIGKRLKRKSDRVQREQGEILSKLEETLGGLK
IIKSFNAEDRFQNSFNTSTKRFNDYANSLMQRQALASPTSEFLGIVVIGVLLWFGGNMVL
TEETLDGPTFIAFMGLAYGILTPAKAFSKASYSVKRGNASAQRILEILETENTITNKDIT
TPVEGFAKAIAINNISFKYEEQLVLKNFTLNVPKGKTVALVGQSGSGKSTIANLLTRFYD
VVSGDITVDGVDIRDMSLKDLRKNIGIVTQDAILFNDSLRNNMIVGKATATDEEIIESLK
IANAWEFVKELPEGLDTNIGDSGNKLSGGQKQRLSIARAVLKNPPIMILDEATSALDTES
ERLVQKALENMMKNRTSIVIAHRLSTIQNADEIVVMQKGEIVEQGKHQELIDQKGMYHKL
VSMQSFEE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggaatattttaagaagattatttcttacgcaatgccttacaagggatatgggattctc
aatatcatttgtaatgtcttttatgcattatttagcaccttaggatttgtagcacttata
cctatgctacaggtcctttttgataaaacaaaaacagttaccgaaaaaccagagtggaac
ggcctcctcaaagcaaaagactttatggaagactctctggggtattatgttacagaaatt
gcaaaagatgataaagtgcaagccctcacgctaatgataggctttgtgattgcggtattc
ttactcaaaaacctttttggttatctagcgatgtacttcattacctttttaagaaatggc
gtcttgatggatattagaaatgctatgtatgagaaaattgtctcactacctgtggcatac
tttacagaaaaacgcaagggtgacaccattgctcgtgtcacatcagatgttcaggaggta
cagcattcatttttaagcatactagagctcattgtaagagagcctcttaccatcacattt
gcgctgggaactatgtttttactcagcccgcagctggcagtatttgtacttacatttata
cctattatgggatttgtaatatcacttataggtaaaagactcaaaaggaagtctgaccgt
gtgcaacgtgagcaaggagagattttatcaaaactagaagaaactctaggcggactcaaa
atcataaaaagttttaatgccgaagatcgttttcaaaatagttttaacacgagcacaaag
cgctttaatgattatgcaaacagtttaatgcaacgccaggctcttgcctcgcctacaagt
gagtttttaggaattgtggtgataggtgttttactttggtttggtggtaatatggtgctt
acagaagaaacactagatggccctacatttatcgcatttatgggactcgcttatgggata
ttaaccccggctaaagcattttctaaagctagttacagtgtaaaacgtggtaatgcctct
gcgcaacgtattctagaaattcttgaaacagaaaatacgattacaaataaagacataaca
acaccagtagaaggctttgcaaaggctattgcaattaataatatttcatttaagtatgaa
gagcaactagtacttaagaacttcacacttaatgtcccaaaaggcaaaacagttgcactg
gtaggccaatctggttctggtaagagtaccattgcaaacctacttacccgtttttatgat
gttgtgtctggtgatattacagtagatggggtagacatacgcgatatgtctcttaaagac
ttaagaaaaaatataggtattgtaacacaagatgctattctatttaacgattctctacgc
aataatatgattgtaggtaaagcaactgcaacagatgaggaaattatagaatcacttaaa
attgcaaatgcttgggagtttgtaaaagagcttccagagggtcttgacactaatataggt
gatagtggtaataaactaagtggtggacaaaagcagcgactgtctatagcgagagcagtg
cttaaaaatccgcctattatgatacttgatgaagctacctctgctcttgatacagagagt
gagcgtctcgtgcaaaaggcactagaaaatatgatgaagaatcgcacctctattgtgatt
gctcacagactctcaactattcaaaatgcagatgagattgtggtaatgcaaaaaggtgaa
attgtagaacaaggaaaacatcaagaattaatagatcagaaaggaatgtaccacaaactg
gtatctatgcaatcttttgaggagtag
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