Dokdonia sp. MED134: MED134_04004
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Entry
MED134_04004 CDS
T03275
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
dok
Dokdonia sp. MED134
Pathway
dok00300
Lysine biosynthesis
dok00470
D-Amino acid metabolism
dok01100
Metabolic pathways
dok01110
Biosynthesis of secondary metabolites
dok01120
Microbial metabolism in diverse environments
dok01230
Biosynthesis of amino acids
Module
dok_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dok00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MED134_04004 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MED134_04004 (lysA)
Enzymes [BR:
dok01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
MED134_04004 (lysA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
MC7
Motif
Other DBs
NCBI-ProteinID:
EAQ38446
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Position
758504..759709
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AA seq
401 aa
AA seq
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MTNKDLLNVVKSYGSPVYVYDADTITAQYNRLTNAFKSVKQLRLNYAVKALSNLSILQHL
KGLGSGLDTVSIQEVQLGLKAGFTPDRIIFTPNGVSLGEIEEVAAMGVQINIDNLSILEQ
FGTKHPETPVCIRINPHVMAGGNTNISVGHIDSKFGISIHQLPHVLRIVENTGMNINGIH
MHTGSDILDIDVFVYATEILFETAKQFSDLTFIDFGSGFKVPYKEGDIETNIEELGEKLG
KRFNAFAKAYKKPLTLTFEPGKFLVSESGKFLVQVNVVKQTTSTVFAQVDSGFNHLIRPM
LYGSQHEINNISNPNGRERFYSVVGYICETDTFANNRRIAEISEGDILAFDNAGAYCFTM
ASNYNSRYRPAEVLIKGGKAHLIRKRETFDDLIANQVLIEE
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgactaataaagaccttttaaacgtagtaaaaagctacggaagccctgtgtatgtgtat
gatgcagacacaattacagcacaatataatagacttacaaacgcctttaaaagtgtaaaa
cagttacgcctcaactatgcagtaaaagcgttaagtaacttgtctattcttcaacactta
aaaggactggggtcaggccttgacacggtatctatacaagaagtgcaacttggtcttaag
gctggctttacaccagatcgtatcatatttactcctaacggagtatctctgggagaaata
gaagaagttgcagcaatgggcgtgcaaatcaatatagataacctttctatattagagcag
tttgggacaaagcacccagagacacctgtatgtatacgtatcaaccctcacgtgatggca
ggaggtaatacaaatatctctgtaggacatatagatagtaaatttgggattagtatccac
cagctaccacacgtactgcgcatagtagaaaacacaggtatgaatataaacggtatacat
atgcataccggtagtgacatactagatattgatgtctttgtgtatgctacagaaatcctt
tttgagacggcaaagcagttcagcgaccttacgtttattgactttggtagtggttttaaa
gtgccttataaagaaggagatatagaaaccaatattgaggagctaggagaaaaactaggg
aaacgttttaacgctttcgcgaaagcgtataaaaaaccattaaccctcacctttgagcca
ggtaagtttctagtaagtgagtctggtaaatttctggtacaggtaaacgtagtaaaacaa
actacctcaacagtatttgcacaagtagacagtggttttaaccatcttatacgacctatg
ctatacggtagccagcacgagataaataacataagcaatccaaacggaagagagcgcttt
tatagcgtagtaggctacatctgtgagacagatacctttgcaaataatagacgcatcgcc
gaaatttctgaaggagacattctcgcttttgataacgcaggtgcttactgctttacaatg
gcaagtaattacaatagccgttacagacctgcagaggtactcataaaaggcggtaaagct
caccttatacgcaagcgagagacctttgatgatcttattgcaaatcaagttctcatagaa
gaatag
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