Dokdonia sp. MED134: MED134_04069
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Entry
MED134_04069 CDS
T03275
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
dok
Dokdonia sp. MED134
Pathway
dok00220
Arginine biosynthesis
dok00240
Pyrimidine metabolism
dok00250
Alanine, aspartate and glutamate metabolism
dok01100
Metabolic pathways
dok01110
Biosynthesis of secondary metabolites
dok01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
dok00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
MED134_04069 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
MED134_04069 (carB)
00220 Arginine biosynthesis
MED134_04069 (carB)
Enzymes [BR:
dok01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
MED134_04069 (carB)
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Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
GARS_A
ATPgrasp_Ter
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
EAQ38459
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Position
complement(743511..746363)
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AA seq
950 aa
AA seq
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MPKNKDLKSILLIGSGPIVIGQACEFDYAGSQSLRSLREDGIETILINSNPATIMTDPSM
ADHVYLLPLTTKSIVEILKKHPNIDAVLPTMGGQTALNLCIEADEKGIWKDFDVELIGVD
IAAINITEDRDQFKNLMRDIGIPMAPQASANSFLKGKEIAQEFGFPLVIRSSFTLGGAGA
SFVFEEEDFDRLLSHGLEVSPVHEVMIDKALLGWKEYELELLRDANDNVVIICAIENMDP
MGIHTGDSITVAPAMTLSDVTYQKMRDMAIHMMRSIGDFAGGCNVQFAVNPDNEEEIIAI
EINPRVSRSSALASKATGYPIAKIATKLAIGYNLDELDNQITKSTSALFEPTLDYVIVKI
PRWNFDKFEGSDRTLGLQMKSVGEVMGIGRSFQEALHKATQSLEIKRNGLGADGKGYKSY
DQIIDKLTHASWDRVFVIYDAIQMGIPLKRIHEITKIDMWFLKQYEELYAMEKEISTFKV
DTLPRNLLLEAKQRGFADRQIAHMLGCLESAVTSKRDELKINRVYKLVDTCAAEFVAQTP
YFYSTFENEMELPDGTRFAQNESVVSDKKKIVVLGSGPNRIGQGIEFDYCCVHGVLAAAE
CGYETIMINCNPETVSTDFDTADKLYFEPVFWEHIYDIIRHEKPEGVIVQLGGQTALKLA
EKLDRYGIKILGTSYQALDLAEDRGSFSTLLKNLDIPYPEFDTAETADEALAVAQKLDYP
ILVRPSYVLGGQGMKIVINDDELEEHVVDLLRKIPNNKLLLDHYLDGAIEAEADAICDGE
DVYIIGIMEHIEPCGIHSGDSNATLPPFNLGDLILEQIKDHTRKIALALDTVGLINIQFA
VKDDKVYIIEANPRASRTVPFIAKAYKEPYVNYATKVMLGEKKVKDFNFNPQLEGYAIKQ
PVFSFNKFPNVNKNLGPEMKSTGESILFIDNLRDDAFYDLYARRKMYLSN
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaaataaagacttaaaatcgattctactcataggttctggacccatagttatt
ggtcaagcgtgtgaatttgattatgcaggatcacaatcactaagatcattaagagaggat
ggaattgagactattctaatcaactctaacccggcaacgattatgacagatccctctatg
gcagatcacgtctatttattgccacttactacaaagtctattgtagagatactcaaaaag
catcctaatatagacgcagtacttcctactatgggaggccagactgcgcttaacctttgt
attgaggcagatgagaagggtatctggaaagattttgatgtagagcttataggtgtagat
atcgcggctattaatattacagaagatcgcgatcagtttaaaaacttaatgcgtgacata
ggaatccctatggcaccacaggcaagtgcaaactcattcttaaaaggaaaagagattgct
caagagtttggttttccattagtaatacgttcttcttttacactaggaggagcgggagca
tctttcgtttttgaagaagaggattttgatagactcctatctcacggtctagaagtatca
ccagtacacgaggtgatgatagataaagccttactaggctggaaagaatatgagctagag
ttactacgtgatgcaaatgataatgtggttattatctgtgctatcgaaaatatggaccct
atgggtatccacacaggagactctattactgtggcacctgcaatgacattatctgatgtt
acttaccaaaaaatgcgtgatatggctatccatatgatgcgcagtataggtgactttgct
ggagggtgtaacgtacagtttgcggtaaacccagataatgaagaagaaattatcgctatt
gagattaacccacgtgtatctagatcatctgcgctggcatcaaaagcaacgggataccct
attgcaaaaatcgctacaaaactagcgataggatacaaccttgatgaactagataaccag
attacaaaatctacatcggcgctttttgagcctacattagattatgtaattgtaaaaata
ccgcgttggaactttgataaatttgaaggaagtgaccgcaccctaggcttacagatgaaa
tctgtaggagaagtaatgggtataggacgctcttttcaagaagccttacacaaagcaaca
cagtcactagagattaaacgtaatggtctaggagcagatggtaaagggtataagagttac
gaccagattatagacaagcttacccacgcaagctgggaccgtgtatttgtgatttatgat
gcgatccagatgggtatcccgcttaaacgtatacacgagattacaaaaatagatatgtgg
ttccttaaacaatatgaggagctatatgcaatggaaaaagagatatctacttttaaggta
gatacgcttccgcgaaatttattactcgaggcaaaacaaagaggttttgcagatagacaa
atagcacatatgctaggatgtctcgaaagtgcagtaacaagcaagcgagatgaattaaaa
ataaacagagtttataaactggtagatacgtgtgcggcagagtttgtagcacaaacgcca
tacttttactcaacttttgaaaatgaaatggagcttcctgacggaactcgatttgctcaa
aacgaaagtgtagtttcagacaagaaaaagatagtagtactaggttcaggacctaaccgt
atagggcaaggtatcgagtttgattactgctgtgtacacggtgtacttgctgcggcagag
tgtggttatgagactataatgataaactgtaaccctgagactgtatctacagattttgac
acggcagataagttatactttgagcctgtattctgggagcatatttatgacatcatacgc
cacgaaaagccagaaggtgtaattgtacaactaggaggacaaacagcacttaaacttgcc
gaaaagcttgaccgttacgggatcaaaattttaggtacaagttaccaagcactagatctt
gccgaagacagaggaagcttctctacattattaaaaaatcttgatattccttatccagaa
tttgatacagcagagacggcagacgaggcgcttgcagtagcacaaaaactagattaccct
atccttgtaagaccatcttatgtactaggaggacaaggaatgaagattgtaataaacgac
gacgagctagaagagcacgttgtagacttactacgtaagatacctaataacaaactacta
ctagatcactacctagacggagcgatagaggcagaggcagatgctatttgtgatggagaa
gatgtatacatcataggtattatggagcacattgagccttgtggtatacactctggtgat
agtaatgcaacattacctccatttaaccttggagaccttatactagagcaaattaaagat
cacactagaaaaattgcactagcacttgatacggtaggtcttataaacatacagtttgct
gtaaaagatgataaagtatacatcatagaggcaaacccaagagcatctcgtacggttcca
tttatagcaaaagcttataaagaaccatatgtaaactatgcaactaaggtgatgctaggt
gagaagaaggtaaaagactttaacttcaacccacagctagaaggatatgcaatcaagcaa
ccagtattctcttttaataagtttccaaatgtaaataagaacttaggaccagagatgaag
agtacaggagagagtatcttatttatagataacctacgtgatgatgctttttacgattta
tacgcaagaagaaagatgtacttgagtaactaa
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