Dokdonia sp. MED134: MED134_04639
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Entry
MED134_04639 CDS
T03275
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
dok
Dokdonia sp. MED134
Pathway
dok03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MED134_04639 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dok03400
]
MED134_04639 (ung)
Enzymes [BR:
dok01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MED134_04639 (ung)
DNA repair and recombination proteins [BR:
dok03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MED134_04639 (ung)
Prokaryotic type
MED134_04639 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
EAQ40011
LinkDB
All DBs
Position
complement(619106..619771)
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AA seq
221 aa
AA seq
DB search
MHVNIEDSWKQELTTEFEKPYFKSLTTFVKEEYATHKCYPPAGEIFSAFDHCPFDKVKVV
IIGQDPYHGAGQANGLCFSVQDGVAHPPSLKNIFKELETDMGLPAPVSGNLDRWAAQGVL
LLNATLTVRAGEAGSHQKQGWEQFTDVVIDTLSRKRENIIFLLWGGFAKKKGRKIDASKH
FILLSGHPSPLSANRGYWFGNKHFSKVNEILLSKGEAPINW
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtaaatatagaagacagctggaagcaagaactcactaccgaatttgagaagcct
tattttaaatcgcttaccacatttgtaaaggaggagtatgctacccacaagtgctatccg
ccggctggggagattttttctgcctttgatcattgcccttttgataaggtaaaagtcgtg
attataggccaagatccttaccacggagcaggacaggctaacggactttgcttttctgtg
caagatggtgtagcgcatcctccatcacttaaaaatatttttaaggagctagagacagat
atggggctacctgcaccagtatctggtaatctagatagatgggcagcacaaggagtttta
cttctcaatgcaacgcttacagtaagagcaggcgaggcaggatctcatcaaaaacaaggc
tgggagcagtttacagatgtggtgatagatacgctttcgcgaaagcgtgaaaacattatt
ttcttactctggggaggatttgccaaaaagaaaggtagaaagatagatgcgtcaaaacat
tttatcctactctctgggcatccatcaccactaagcgcaaacagagggtactggtttggt
aacaagcattttagtaaggtaaatgagattttattgagtaaaggagaagcaccaataaac
tggtaa
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