KEGG   Dokdonia sp. MED134: MED134_04749
Entry
MED134_04749      CDS       T03275                                 
Symbol
gyrB1
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
dok  Dokdonia sp. MED134
Brite
KEGG Orthology (KO) [BR:dok00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dok03032]
    MED134_04749 (gyrB1)
   03036 Chromosome and associated proteins [BR:dok03036]
    MED134_04749 (gyrB1)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dok02048]
    MED134_04749 (gyrB1)
Enzymes [BR:dok01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     MED134_04749 (gyrB1)
DNA replication proteins [BR:dok03032]
 Prokaryotic type
  DNA Topoisomerases
   MED134_04749 (gyrB1)
Chromosome and associated proteins [BR:dok03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    MED134_04749 (gyrB1)
Prokaryotic defense system [BR:dok02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    MED134_04749 (gyrB1)
SSDB
Motif
Pfam: DNA_gyraseB Toprim HATPase_c DNA_gyraseB_C
Other DBs
NCBI-ProteinID: EAQ40033
LinkDB
Position
complement(597648..599504)
AA seq 618 aa
MAQETQYNEDNIRSLDWKEHIRMRPGMYIGKLGDGSSADDGIYILVKEVLDNCIDEFVMG
AGKTIEISIQGEKVIVRDYGRGIPLGKVVDVVSKMNTGGKYDSRAFKKSVGLNGVGTKAV
NALSNYFRVESTRDGKSASAEFERGELTNQDLLDETSRRRGTKVSFVPDSEIFKNFKFRS
EYVERLIKNYVYLNPGLTIVFNGEKFFSENGLKDLLSESIAEGDRLYDIIHLKGEDIEVA
ITHSKTQYSEEYHSFVNGQHTTQGGTHQAAFRESIVRTIREFYGKNYEASDIRKSIVSAI
SIKVMEPVFESQTKTKLGSTDMGGDLPTVRTYINDFLKTALDNFLHKNPPVADALQRKIL
QAERERKDLSGIRKLAKERAKKASLHNKKLRDCRIHLTDSKKARNLETTLFITEGDSASG
SITKSRDVNTQAVFSLKGKPLNSYGLSKKIVYENEEFNLLQAALNIEESIEDLRYNNIVI
ATDADVDGMHIRLLLITFFLQFFPEVIKEGHLYILETPLFRVRNKKETIYCYSDQEKADA
MAKLGAKPEITRFKGLGEISPDEFQFFIGEDMRLAPVMLDKALMIEELLSFYMGKNTPDR
QKFIIENLKVELDRVVEE
NT seq 1857 nt   +upstreamnt  +downstreamnt
atggctcaagaaacacaatacaacgaagataatatacgctccctcgactggaaggagcat
atccgtatgcgtcccgggatgtatataggtaaactaggcgacggctcaagtgcagatgat
ggtatctatatccttgtaaaagaggtgcttgataactgtatagatgaatttgtgatgggt
gcgggtaagaccattgagatttctatacaaggcgaaaaagtaatcgtacgcgattacggc
cgtgggattccgctaggaaaagtggttgatgtggtttcaaaaatgaacacgggtggtaag
tatgactcgcgtgcatttaagaaatctgtaggcctcaacggtgtaggtacaaaggcggta
aatgctctttctaactattttagagtagagtctacaagagatggtaagtctgcaagtgca
gagtttgagcgtggagagcttacaaatcaagacttactagatgagacttctcgtaggcgc
gggactaaggtttcgtttgtaccagatagtgagatattcaagaactttaagtttcgctct
gagtatgtggagcgccttataaagaactatgtataccttaatccgggtctgaccattgtt
tttaacggtgagaagttcttttctgaaaatggattaaaagatttactatctgagtctata
gcagaaggggatagactttatgacattattcatcttaaaggtgaagatattgaggtcgca
atcacacacagtaaaacgcagtactcagaagagtatcactcttttgtaaacgggcagcat
accactcaaggaggtacacatcaagcggcatttagagagagtatcgtgcgtactatacga
gagttttatggtaaaaactatgaagcttcagatattagaaagtccattgtttccgctata
agtattaaggtgatggagcctgtttttgagtcgcagacaaagaccaaactgggttctaca
gatatgggaggagacttacctacggtaagaacctacataaatgatttcttaaaaaccgcc
cttgataacttcttgcataaaaatccgccagtggcagatgccttgcaacgtaagatttta
caagcagagcgtgagcgtaaagatctctctggaataagaaaacttgcaaaggagagagca
aaaaaagcgagtttacataataagaaattaagagattgccgtatacatcttacagatagt
aagaaagcccgaaacctagagactacactgtttatcacagagggagactctgcttctgga
tctataacaaagtcacgagatgtaaacacacaagcggtttttagccttaaagggaaacct
ctcaatagctacggtctttctaaaaagattgtttacgaaaacgaagagtttaacctatta
caagcggcacttaatatagaagagtctattgaagatttgcgctataacaacattgtaatc
gctaccgatgccgatgtagatggtatgcacatacgcctgttactaattacattttttctt
cagttttttcctgaagtaattaaggaaggacatctgtatatactagagacgccacttttt
agggtacgtaataagaaagaaaccatatactgctacagtgatcaagaaaaggcagatgcg
atggcaaagctaggcgccaagccagagataacacgatttaaggggcttggtgagatatcg
ccagatgagtttcagttttttataggagaagatatgagacttgcacccgtgatgcttgac
aaagcacttatgatagaggaacttctttcattctatatgggtaaaaacaccccagataga
cagaagtttattattgaaaatctaaaggtagaactagatagagtagtagaggagtaa

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