KEGG   Dokdonia sp. MED134: MED134_04754
Entry
MED134_04754      CDS       T03275                                 
Symbol
gyrA3
Name
(GenBank) DNA topoisomerase IV subunit A
  KO
K02621  topoisomerase IV subunit A [EC:5.6.2.2]
Organism
dok  Dokdonia sp. MED134
Brite
KEGG Orthology (KO) [BR:dok00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dok03032]
    MED134_04754 (gyrA3)
   03036 Chromosome and associated proteins [BR:dok03036]
    MED134_04754 (gyrA3)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dok02048]
    MED134_04754 (gyrA3)
Enzymes [BR:dok01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     MED134_04754 (gyrA3)
DNA replication proteins [BR:dok03032]
 Prokaryotic type
  DNA Topoisomerases
   MED134_04754 (gyrA3)
Chromosome and associated proteins [BR:dok03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    MED134_04754 (gyrA3)
Prokaryotic defense system [BR:dok02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    MED134_04754 (gyrA3)
SSDB
Motif
Pfam: DNA_topoisoIV Ribosomal_S13 FliC-like_3rd
Other DBs
NCBI-ProteinID: EAQ40034
LinkDB
Position
complement(594930..597611)
AA seq 893 aa
MSEEINDHNQDEELNSDMLSSQTGEGSGETITRVSGMFEDWFLDYASYVILERAVPAIED
GFKPVQRRIMHALKELDDGRYNKVANVVGHTMQYHPHGDASIGDAMVQIGQKDLLIDTQG
NWGNILTGDRAAASRYIEARLSKFALDVVYNPKITDWQASYDGRKKEPINLPVMFPLLLA
QGAEGIAVGLSTKVMPHNFIELIDASIKHLKGKRFTIYPDFPTAGIADFTDYKDGLRGGK
IRCRARMSQQDKNTLVITELPFGQTTTSLIDSILKANDKGKIKIKKIEDNTSANVEILVH
LPSGISPDKTIDALYAFTNCETSISPLGCVIEDNKPLFVGVSEMLRRSTDRTKALLKSEL
EIQLGEFENQWHYASLERIFIENRIYRDIEEQETWDGVIEAIDKGLKPHIGHLKRAVTVE
DITRLTEIRIKRISKFDIDKAQQKIDALEDQIAQVKHHLDNLTQYAIDYFTRLKKDYGKG
KERKTEIRVFDDIQAAKVVLRNTKLYVNRAEGFVGTSLKRDEYVTDCSDIDDIIVFTKSG
SMMVVKVESKTFIGKDIIHVAIFKKKDKRTTYNMIYRAGSGLPTYVKRFNVTSVTRNNDY
QLAGDKKGAQVLYFSANPNGEAELVTVYLRAVASVKKLRLEVDFADVLIKGRSSKGNIVS
KNAVKSVELKEKGLSTLKPRKIWFDETVQRLNLDERGDLLGEFRPDDRLLIINQHGNVRT
IIPEVTHHFDDDMIVLEKWVPKKPITAIYWDGEKERYYGKRFLIDSPDKEETFISDHNNS
QLELVSTDWRPVAEMVFYKQRGKDQRENETVSMEDFIAIKGISAMGNTFFTEKLKGLNWI
DSLPYEEVQEVPKTEIEVVDEKVVSPSGVATAQGTKPSDDENGDDGEGQTTLF
NT seq 2682 nt   +upstreamnt  +downstreamnt
atgagcgaagaaataaacgaccataaccaagacgaagaattaaactcagatatgctttca
tctcaaacaggagaaggaagtggggagacgattactcgtgtctcaggaatgtttgaagat
tggtttttagactatgcatcttatgtaatacttgagcgtgctgtacctgcaatagaggat
ggctttaagcctgtgcagcgacgtattatgcacgcacttaaggagctagatgatggccgt
tataataaagtagcaaatgtagtagggcacacgatgcagtatcaccctcacggtgatgcg
agtataggtgatgcaatggtgcaaataggtcagaaagacctacttattgatacacagggt
aactggggtaatattttaaccggagaccgcgcggcggcatctagatatattgaggcacgc
ctttcaaaatttgcactagatgttgtgtataacccaaagattacagactggcaggcctct
tatgatgggcgtaaaaaagagcctataaacttaccagtaatgtttcctttattactcgct
caaggtgcagagggaattgccgtaggcttaagtactaaggtgatgcctcacaactttata
gagcttatagatgcttctataaaacatctcaaaggaaaacgatttaccatttatccagat
tttcctaccgctggtattgcagattttacagactataaagacggtttaagaggagggaag
atacgctgtcgtgctcgtatgagccagcaggataaaaacacgctagtaattactgagctg
ccctttggacagactactacatcgctcatcgattctattcttaaagcaaatgataagggt
aaaatcaagataaaaaagatagaagataatacctctgcaaatgttgagatacttgtgcac
ttgcctagtggtatttctccagataaaaccatagatgcactgtatgcatttacaaattgt
gagacatctatatcaccactaggttgtgttattgaagataacaagccactttttgtggga
gtgtcagaaatgctacgcaggtctacagatcgtacaaaagcacttcttaagtctgagtta
gaaatccagcttggagagtttgaaaaccaatggcattatgcttcactagaacgtattttt
atcgagaatagaatttaccgtgatattgaagagcaagagacttgggacggtgtaatagaa
gcaatagataaaggtttaaaaccacacataggtcacttaaagcgcgcagtgactgtagaa
gatatcacacgtcttaccgagatacgtattaagcgtatttctaagtttgatatagataaa
gcacagcagaagatagatgcacttgaggatcaaatagcccaagtaaaacatcatctggat
aatctcacacagtatgcgatagattattttacgcgtctcaaaaaagattacggaaaagga
aaagaacgtaaaactgagatccgtgtttttgacgatattcaagcagctaaggttgtgctc
agaaacactaaactttatgtaaacagggctgaaggttttgtaggtacttctcttaaaagg
gatgagtatgttacagattgttcagacatagatgatattattgtttttacaaagtctgga
tctatgatggtggttaaggtggagtctaaaacctttataggtaaagacatcatacacgta
gctatctttaagaaaaaagataaacgcaccacctataatatgatttacagagcaggtagt
ggactacctacttatgtaaaacgttttaatgttacctctgtcacgcgtaataatgattac
cagcttgctggtgataaaaaaggagcacaagtactctattttagcgcaaatccaaatggt
gaggcagagcttgttaccgtctatttaagagctgtagcctctgtaaagaaacttagactt
gaggtagactttgcagatgtactcataaaagggagatcttcaaaaggaaatattgtctca
aaaaatgctgtaaaatctgtagagcttaaggagaaaggcctttctacgctcaagcctcgt
aaaatatggtttgacgagactgtgcaaagactcaatcttgatgagcgaggagatcttctg
ggagaatttagaccagatgacagattacttatcattaaccagcacggtaacgtgcgtacc
attataccagaggtaacgcatcactttgatgatgatatgattgtactagagaagtgggtg
cctaaaaagcctataaccgcaatttattgggatggagaaaaggaacgttactacggtaag
cgttttttaatagatagtccagataaggaagaaacctttatttcagatcataacaacagc
cagctagaacttgtatctacagactggagacctgttgcagagatggttttttacaagcaa
cgtggtaaagaccagcgtgagaatgaaacagtgtctatggaagattttatcgctattaag
ggtatttcggcaatgggtaatacgttctttaccgaaaagctaaaaggcctcaactggata
gattctctaccttatgaagaagtgcaagaagtacctaaaacagagatagaagtagtagac
gagaaggttgttagtccttcaggagtcgctactgcacagggcacaaagcctagtgatgat
gaaaacggggatgacggcgaagggcaaactaccttattttaa

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