Dokdonia sp. MED134: MED134_05489
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Entry
MED134_05489 CDS
T03275
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
Organism
dok
Dokdonia sp. MED134
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
Zeta_toxin
APS_kinase
HUTI_composite_bact
AAA_5
AAA_22
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
EAQ40181
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Position
complement(419665..421416)
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AA seq
583 aa
AA seq
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MTKEKEKKKNVTIASAFTSIIWPRRKLVFIGLILIVIGRLASLILPWKSKALLDDIIPNK
DMSALYDLLWLVGFALLIQAVTSFLLTRILSVQAQYLISELRAQVQKKVLSLPISFFDNS
KSGALVSRIMSDVEGVRNLIGTGLVQLVGGTITAVVSLVLLIRINALMTLFVFLPVAIFG
YVALRAFKYIRPIFRNRGKINAQVKGRLTETLAGVRVIKGFGAEAQENKTFEEGVDMLFQ
NVKKSLTATAVMTSSSTFLLGLASVGIMGIGGYFMIQGEMTTGEFLFFTLLLGFMIAPIV
QMSNIGSQLTEALAGLDRTEELMNMTPEDELGNRDITLDKLHGDIKFDNVSFSYEKGKQV
IHNISFEAKAGTTVALVGSSGSGKSTIAGLAATFLNPQSGEVSVDGNDLSRVQLSSYRQN
LGVVLQDEFLFEGTIRENILFPRPNASEERLLKAVKAGYVNEFTDRFDDGLDTLIGERGV
KLSGGQRQRIAIARAILADPKIIILDEATSNLDTESEALIQKSLSELVKDRTTIVIAHRL
STIKKADQILVIEDGRIAEQGTHDTLIAQEGRYYDLYTYQAKI
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaggaaaaagaaaaaaagaaaaatgtcactatagcatctgcctttacatctatt
atttggccacgccgaaagttagtttttataggcctcatattaatagttataggtagactt
gccagccttattttaccttggaaatctaaggctctactggatgacattattcctaataag
gatatgagtgctctttatgatctactctggctcgtaggttttgcattactcatacaggca
gtaacgtcatttttactcacgcgcatactaagtgtgcaagcacaatacctcatatcagaa
ttaagagctcaggttcaaaaaaaggtactgtcactacctataagtttttttgataattct
aagtctggagccctagtttctcgtattatgagtgatgtagaaggagtacgtaatttaata
ggtacagggcttgtacagcttgtgggaggtactattactgccgtagtctcactagtatta
ttaataagaattaatgcgttaatgacgttatttgtctttttaccagtagccatttttggc
tatgtagcgttgcgagcatttaagtatatacgtcccatttttagaaatagaggtaaaata
aatgctcaggtaaaaggaagacttacagaaacacttgcaggagtgcgcgtgattaaaggt
tttggagcagaggcacaagaaaacaaaacttttgaagaaggagtagatatgctttttcaa
aatgtaaagaagagtcttactgcaacagctgtaatgaccagtagttctacatttttacta
ggtcttgcctctgtaggtataatgggtataggaggttattttatgatacaaggagagatg
accaccggtgagtttttattttttacactcttacttggttttatgatcgctcccatcgta
cagatgagtaatataggtagccagctcacggaggcacttgcgggtctagatcgtactgag
gagttaatgaatatgacaccagaagacgagctgggtaatcgtgatataacacttgataaa
ttacacggtgatatcaagtttgataatgtttctttctcttacgagaaaggcaaacaagtg
atacataatatctcatttgaagcaaaagcgggtacaacagttgcactagtgggaagctcc
ggatctggtaagtctaccattgcaggcctggcggctacatttttaaatccgcaatctgga
gaagtatctgtagatggtaatgacttgtctcgagtacagctatcaagttacagacaaaat
ttaggggtcgttcttcaagacgaatttctttttgagggaactatacgtgagaatatactc
tttcccagaccaaatgctagtgaagaacgcttattaaaggctgtaaaagcaggttatgta
aatgaatttacagaccgttttgatgacggtcttgacaccttaataggtgagcgtggggtt
aagctatctggaggtcagcgacaacgcatcgccatagctagggctatactcgcagatcca
aaaataattatactagatgaggcaacctcaaatctcgatacagagagtgaagcgcttatt
caaaaatcgctctctgagctcgtaaaggatagaacgacaattgtaatcgcccatagactc
agtacgattaaaaaagcagatcagattctagtgattgaagatggccgtatagcagagcag
ggtactcacgatacgctcatagcgcaagagggaagatattatgatctttatacctatcaa
gcaaaaatatag
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