Dokdonia sp. MED134: MED134_06029
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Entry
MED134_06029 CDS
T03275
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
dok
Dokdonia sp. MED134
Pathway
dok00521
Streptomycin biosynthesis
dok00523
Polyketide sugar unit biosynthesis
dok00525
Acarbose and validamycin biosynthesis
dok00541
Biosynthesis of various nucleotide sugars
dok01100
Metabolic pathways
dok01110
Biosynthesis of secondary metabolites
dok01250
Biosynthesis of nucleotide sugars
Module
dok_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
dok00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MED134_06029 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MED134_06029 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
MED134_06029 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MED134_06029 (rfbB)
00525 Acarbose and validamycin biosynthesis
MED134_06029 (rfbB)
Enzymes [BR:
dok01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
MED134_06029 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
3Beta_HSD
NmrA
Methyltransf_31
Motif
Other DBs
NCBI-ProteinID:
EAQ40289
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All DBs
Position
308849..309892
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AA seq
347 aa
AA seq
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MNILITGGAGFIGSHLVRLFLEVFPESHIYNLDALTYAGNLENLADVEASSNYTFIKGDI
NDAPFLMTLFSKYQFDKVIHLAAESHVDRSIKNPLAFVQTNVIGTLNLLNAAKEIWKDNF
NDKLFYHISTDEVYGTLGETGLFTETTSYDPNSPYAASKASSDHFVRAYGETYGLPYIIS
NCSNNYGPNQFPEKLIPLFINNIILNKALPVYGDGNYTRDWLFVKDHARAIARIFKEGKL
GETYNIGGVNEWKNIDLVKLLCDKMDEKLSRKRNTSQSLITFIKDRPGHDKRYAIDASKI
EKELGWKPSVTFEEGLELTIDWYLANSSWLENVTSGAYQEYYNKMYT
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaatatattaataacaggcggagcaggttttataggttctcacttagtgaggctattt
ctagaagtttttccagagagtcatatttacaatcttgatgcacttacatatgcaggtaat
ctagagaacctggctgatgtagaagcgtctagcaattatacatttataaaaggggacatc
aatgatgccccctttttgatgaccttattttccaaatatcaatttgataaggtaatacac
ctagcagcagagtctcacgtagatagaagtattaaaaatcctctagcttttgtgcagact
aacgttattggaacattaaacttgctcaatgcagctaaggaaatatggaaagataacttt
aatgacaagcttttctaccatataagtacagacgaggtgtatggtacacttggtgagaca
ggcttgtttacagagactacgtcatacgacccaaactcaccctatgctgcgtctaaggca
agctcagatcattttgttagagcttatggtgagacctatggcttgccatatatcattagt
aattgctctaataattatggtcctaatcagtttccagaaaaactcattcctctatttata
aataatattattttaaacaaggcgctacctgtttacggtgatggaaattatacaagagat
tggttatttgtaaaagatcacgcaagagctatagcacgtatatttaaagaaggaaaacta
ggcgagacctacaatataggtggggttaatgaatggaaaaatattgatctcgtaaagtta
ctatgtgataagatggatgagaagctttcgcgaaagcgtaatacctctcaatctcttatt
acctttataaaagacagaccaggtcacgacaagcgatatgcgatagatgcctcaaaaatt
gaaaaagaactggggtggaaaccatctgttacttttgaggaagggctagaactcacaata
gattggtatcttgccaatagctcttggctagagaatgtcacttctggagcatatcaagaa
tattacaataaaatgtatacataa
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