KEGG   Dokdonia sp. MED134: MED134_06029
Entry
MED134_06029      CDS       T03275                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
dok  Dokdonia sp. MED134
Pathway
dok00521  Streptomycin biosynthesis
dok00523  Polyketide sugar unit biosynthesis
dok00525  Acarbose and validamycin biosynthesis
dok00541  Biosynthesis of various nucleotide sugars
dok01100  Metabolic pathways
dok01110  Biosynthesis of secondary metabolites
dok01250  Biosynthesis of nucleotide sugars
Module
dok_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:dok00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    MED134_06029 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    MED134_06029 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    MED134_06029 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    MED134_06029 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    MED134_06029 (rfbB)
Enzymes [BR:dok01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     MED134_06029 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 NAD_binding_4 RmlD_sub_bind 3Beta_HSD NmrA Methyltransf_31
Other DBs
NCBI-ProteinID: EAQ40289
LinkDB
Position
308849..309892
AA seq 347 aa
MNILITGGAGFIGSHLVRLFLEVFPESHIYNLDALTYAGNLENLADVEASSNYTFIKGDI
NDAPFLMTLFSKYQFDKVIHLAAESHVDRSIKNPLAFVQTNVIGTLNLLNAAKEIWKDNF
NDKLFYHISTDEVYGTLGETGLFTETTSYDPNSPYAASKASSDHFVRAYGETYGLPYIIS
NCSNNYGPNQFPEKLIPLFINNIILNKALPVYGDGNYTRDWLFVKDHARAIARIFKEGKL
GETYNIGGVNEWKNIDLVKLLCDKMDEKLSRKRNTSQSLITFIKDRPGHDKRYAIDASKI
EKELGWKPSVTFEEGLELTIDWYLANSSWLENVTSGAYQEYYNKMYT
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgaatatattaataacaggcggagcaggttttataggttctcacttagtgaggctattt
ctagaagtttttccagagagtcatatttacaatcttgatgcacttacatatgcaggtaat
ctagagaacctggctgatgtagaagcgtctagcaattatacatttataaaaggggacatc
aatgatgccccctttttgatgaccttattttccaaatatcaatttgataaggtaatacac
ctagcagcagagtctcacgtagatagaagtattaaaaatcctctagcttttgtgcagact
aacgttattggaacattaaacttgctcaatgcagctaaggaaatatggaaagataacttt
aatgacaagcttttctaccatataagtacagacgaggtgtatggtacacttggtgagaca
ggcttgtttacagagactacgtcatacgacccaaactcaccctatgctgcgtctaaggca
agctcagatcattttgttagagcttatggtgagacctatggcttgccatatatcattagt
aattgctctaataattatggtcctaatcagtttccagaaaaactcattcctctatttata
aataatattattttaaacaaggcgctacctgtttacggtgatggaaattatacaagagat
tggttatttgtaaaagatcacgcaagagctatagcacgtatatttaaagaaggaaaacta
ggcgagacctacaatataggtggggttaatgaatggaaaaatattgatctcgtaaagtta
ctatgtgataagatggatgagaagctttcgcgaaagcgtaatacctctcaatctcttatt
acctttataaaagacagaccaggtcacgacaagcgatatgcgatagatgcctcaaaaatt
gaaaaagaactggggtggaaaccatctgttacttttgaggaagggctagaactcacaata
gattggtatcttgccaatagctcttggctagagaatgtcacttctggagcatatcaagaa
tattacaataaaatgtatacataa

DBGET integrated database retrieval system