Dokdonia sp. MED134: MED134_06064
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Entry
MED134_06064 CDS
T03275
Name
(GenBank) exodeoxyribonuclease V alpha chain
Organism
dok
Dokdonia sp. MED134
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_30
UvrD_C_2
AAA_19
PIF1
Viral_helicase1
SLFN-g3_helicase
UvrD_C
AAA_22
AAA_11
Helicase_RecD
NPHP3_N
ResIII
cobW
NB-ARC
TsaE
AAA_16
Glyco_hydro_57
Torsin
AAA_7
SH3_13
NACHT
SRP54
Rad26-like_N
Motif
Other DBs
NCBI-ProteinID:
EAQ40296
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Position
302083..303612
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AA seq
509 aa
AA seq
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MVSNKSTIFFYTQKFIISFFVCLISLYSKPSMIKDARAFYKLLVKDFEHQPTIKQDRLLE
QLSHFLFDSSKDKVFVLKGFAGTGKTTVIGTVVKNLWHAKMSSVLMAPTGRAAKVASNYS
KKQAYTIHRKIYFPKKERGGGVSFTLQPNKHRNCLFIVDEASMISDKATSSKFFDNGSLL
DDMMQYVYSGYKCKLILVGDEAQLPPVKLEMSPALDIDMLSLQFNKTVETIQLDEVMRQG
EDSGILMNATALREQLSEGFYEDFKFELEGYNDIVRLVDGHEIMDAINDCYSSVGTEETA
IIVRSNKRANLYNQQIRNRILFQEEEISAGDHLMVVKNNYFWLDAKSDAGFIANGDIVKV
LEILAIKELYGFRFAEVKVQMVDYPQMQPFETVVMLDVLILETPALPYEDGDRLYKEVQK
DYVDEKSNYKRFQKIKNNKYFNALQVKFSYAITCHKSQGGQWENVFIEQPYLPDGMSKDY
LRWLYTAITRAKSKLYLIGFKDEMFVEAE
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggtgagcaacaaatctacaatttttttttacacacaaaaatttattatctcatttttc
gtttgcttaatttcgttgtattctaagccttctatgattaaagacgcccgagcattttat
aagctattagtaaaagattttgaacatcaacctaccataaaacaagataggctactagag
cagttatctcactttttgtttgatagttctaaggataaagtattcgttcttaaagggttt
gcaggtacaggtaagactacagtgataggaacggttgtaaaaaatctttggcacgcaaaa
atgtcatcagttcttatggcacctacgggtcgagctgcaaaggttgccagtaattatagt
aaaaaacaggcgtatactatacatcgcaaaatttatttccccaaaaaagaacgtggagga
ggcgtttcttttacgctacagcctaataaacatagaaactgtctctttatagtagatgag
gcatctatgatatctgataaagcaactagttccaagttttttgacaatggatctctgcta
gatgatatgatgcaatacgtgtatagtggttacaaatgtaaactcatattagtaggagac
gaggcgcagttaccacctgtaaagcttgagatgtccccagctctagatattgatatgttg
tcattgcagtttaataaaaccgtagagactatacagctagacgaggtaatgcgtcaagga
gaagatagtggtatacttatgaatgcaaccgctctaagagaacagctttctgaagggttt
tatgaagattttaaatttgaattagaagggtataacgatattgttaggctagtagacggt
cacgagattatggatgccattaatgattgttacagctctgtaggtacagaagaaactgca
atcattgtaagatccaacaagagagcaaatctatataaccagcaaataagaaatcgaatt
ctatttcaagaagaagaaatatctgcaggagaccacttaatggtggtaaaaaataattac
ttctggctagatgcaaaaagcgatgcggggtttattgcaaacggtgacattgtaaaagta
ttagaaattctagctattaaggaactctacggctttcgctttgcagaggtaaaagtacaa
atggtagattacccacaaatgcaaccatttgagactgtagttatgctagatgttctcata
cttgagacaccagcactaccttatgaagatggagatcggctctataaagaagttcaaaaa
gactatgtagacgagaagtctaattacaagcgattccaaaaaataaaaaacaacaaatac
tttaacgccttacaggttaaattctcttatgctattacttgtcacaaatcacaaggaggg
cagtgggaaaatgtttttatagagcaaccctaccttccagacgggatgagtaaagattac
ctacgctggctgtatacggctattaccagagctaaaagtaagctgtacttaataggtttt
aaagacgaaatgtttgttgaagcagagtag
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