Dokdonia sp. MED134: MED134_06404
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Entry
MED134_06404 CDS
T03275
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
dok
Dokdonia sp. MED134
Brite
KEGG Orthology (KO) [BR:
dok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dok03016
]
MED134_06404 (rnz)
Enzymes [BR:
dok01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
MED134_06404 (rnz)
Transfer RNA biogenesis [BR:
dok03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
MED134_06404 (rnz)
Prokaryotic type
MED134_06404 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
tRNA-synt_1c_C
Motif
Other DBs
NCBI-ProteinID:
EAQ40364
LinkDB
All DBs
Position
223242..224159
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AA seq
305 aa
AA seq
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MSSNLHLTILGCYAAAPGSYKNPTSQVLEIRNNLFLIDCGEGTQVALRRNKIKFARIKHI
FISHLHGDHFFGLMGVITTFSLLKRTAPLTIYGPKGIKELILLQLKLTKGFTSYPLHFRE
ITSKESEVILENEEITVTTIPLKHRIYTNGFYFEEKLGERKLDITACLKLDIDRAYYNKI
KQGGDITLDNGTVVKNEQLTFDPPQPKSYAYCSDTAYYEEIVSQIQGATALYHEATFLES
HAHLCKPTGHSTAAQAAQIAAMAGVKNLILGHYSVRYGDLQEFIKEAAPYFENVHLGDDG
KNFTF
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcaatctacatcttaccattttaggttgttatgcagcagcaccaggtagttat
aaaaatcccacctctcaagttttagaaatacgcaacaacctatttcttatagattgtggt
gagggtactcaagtagcgttacgacgcaataagattaagtttgcccgtattaaacacatt
tttatatcacacctgcacggtgatcatttttttggtcttatgggcgtgataacaactttt
agtttacttaaacgtactgcaccacttaccatttatggccctaagggtataaaagagctt
atcttactgcaattaaaactcacaaaaggatttacaagctatcccttacactttcgtgaa
ataacaagtaaggagtcagaagtgattttagaaaatgaagagattacggtaaccactata
ccactcaagcatcgcatctatacaaatggtttttactttgaagaaaaactaggtgagcgc
aagctagatataactgcttgtttaaaactagatatagatcgtgcatattataataaaata
aagcagggaggagatatcaccttagataacgggacggttgtaaaaaatgaacaactcacc
tttgatccgccgcaacctaaaagttatgcctattgtagtgatactgcttattatgaagaa
attgtatcacaaatacaaggggcaacagcattgtatcacgaggctacatttctagaaagt
cacgcacacttgtgtaaacctactgggcacagtacagcagcacaagcagctcaaatagca
gctatggctggagtaaaaaatttaatattaggtcactactctgtacgatatggtgattta
caagaatttataaaagaagccgcaccctactttgaaaatgtacacctaggtgacgatggt
aagaatttcaccttttaa
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