Dokdonia sp. MED134: MED134_06589
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Entry
MED134_06589 CDS
T03275
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
dok
Dokdonia sp. MED134
Pathway
dok00260
Glycine, serine and threonine metabolism
dok00460
Cyanoamino acid metabolism
dok00630
Glyoxylate and dicarboxylate metabolism
dok00670
One carbon pool by folate
dok00680
Methane metabolism
dok01100
Metabolic pathways
dok01110
Biosynthesis of secondary metabolites
dok01120
Microbial metabolism in diverse environments
dok01200
Carbon metabolism
dok01230
Biosynthesis of amino acids
dok01240
Biosynthesis of cofactors
dok04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
dok00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MED134_06589 (glyA)
09102 Energy metabolism
00680 Methane metabolism
MED134_06589 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MED134_06589 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
MED134_06589 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
MED134_06589 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
MED134_06589 (glyA)
Enzymes [BR:
dok01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
MED134_06589 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
EAQ40401
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Position
191085..192359
Genome browser
AA seq
424 aa
AA seq
DB search
MQRDTAIFDLIQEEKERQLNGLELIASENFVSDQVMEAAGSVLTNKYAEGYPGKRYYGGC
EVVDEVETLAIERAKELFGAAYANVQPHSGSQANTAVFHACLKPGDKFLGFDLAHGGHLT
HGSPVNFSGRLYNPVFYGVDKETGLLNYDKIQEIATAEQPKMIIAGASAYSREIDYKRFR
EIADSVGAILLADVAHPAGLIAKGIIADPIPHCHVVTTTTHKTLRGPRGGMILMGEDFEN
PFGITLKSGKKRMMSSLLDSGIFPGNQGGPLMHVIGAKAIAFGEALTDEFLHYMVQVKKN
ATTLADALVLKGYDIISGGTDNHMMLIDLRNKDVTGKAAEEALGKADITVNKNMVPFDDK
SPFVTSGIRIGTAAVTTRGLVEGDMHEIANFIDKAIQHHDNDEVLENVAKSVNEMMGHRP
LFKA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcgacaccgccatttttgacctaatacaagaagaaaaagaacgccaacttaat
ggccttgagcttattgcttcagaaaattttgtaagtgaccaggtaatggaagctgcagga
tctgtactaactaacaaatatgcagaagggtatcctggtaagcgttattatggtggttgt
gaagtagtagacgaggtagagacacttgctatagagcgcgcaaaggaactttttggagcc
gcctatgcaaacgtacagccgcactcaggttctcaagcaaacacggccgtttttcacgct
tgtttaaaaccaggagataaatttttaggttttgaccttgctcacggtggtcacttaaca
cacgggtcgccagtaaacttttctggtcgcttatataaccctgttttttacggagtagat
aaggaaacaggattacttaattacgataaaatacaagaaatagcgactgcagagcagcct
aaaatgatcatagcaggtgcctctgcatactcacgtgagattgattataaacgcttccgc
gaaattgcagactcagtaggcgccatccttcttgcagatgttgctcatccagcaggtctt
attgcaaaaggaatcatagcagaccctataccacactgtcacgtagtaacaactactacg
cacaaaacactaagagggccacgcggcggaatgatacttatgggtgaagattttgaaaac
ccttttggaatcacacttaaaagtggaaagaaacgtatgatgtcttctctactagatagt
ggtattttcccaggtaaccaaggaggaccattaatgcacgtgataggagcaaaggcaatt
gcctttggagaagcacttacagatgagtttttacactatatggtgcaggttaagaaaaat
gcaactacactagcagatgcacttgtgcttaaaggctatgacattatatctggaggtaca
gataaccatatgatgcttatagacctacgcaataaagatgtaacgggtaaagctgccgaa
gaagcgctaggtaaggcagacattacggtaaacaagaatatggtaccatttgatgacaag
tcaccatttgtaacttctggtatacgtataggtactgctgcagtaactacacgaggtctt
gtagaaggtgatatgcacgagattgcaaactttatagacaaggcaatacagcaccacgat
aatgacgaggtgctagaaaacgttgcaaaaagtgtgaacgagatgatggggcacagacca
ttgtttaaagcatag
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