Dokdonia sp. MED134: MED134_07986
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Entry
MED134_07986 CDS
T03275
Symbol
susC27
Name
(GenBank) TonB dependent/ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
dok
Dokdonia sp. MED134
Brite
KEGG Orthology (KO) [BR:
dok00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dok02000
]
MED134_07986 (susC27)
Transporters [BR:
dok02000
]
Other transporters
Pores ion channels [TC:
1
]
MED134_07986 (susC27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
EAQ39414
LinkDB
All DBs
Position
complement(1802338..1805061)
Genome browser
AA seq
907 aa
AA seq
DB search
MCNVIAIMPKYTKSLLFLFFIISTVSYSQTRAKIVGVVTDNYGVLPGALVSIEGYNKSTQ
TDIDGAFSFEVDEGEYVLSASFVMYNVQYNTVVLKAGDIKEINFKLETGFSADEPISLGT
RSDPVSSFQNTASVDIISPQQISNSPQIELSQILHYLAPSFYSTHQTIADGTDHIDPATL
RGLGTDQVLVLINGKRRHNSSLLNVNGTIGRGAVGTDFNAIPVSAIERIEILRDGATSQY
GSDAIAGVINIVLKKQTNAITLDNLVKINQEGDGLTQFAGANFGMKIGKEGFLNLTGEYR
KREATNRAGNYTGSVYVDNAEEDASLIEENDFYTQTGYSDRRVMQIGNAETQNLAIHFNG
EIKVSDSAKVYLNGGRNYREGKSAGFYRFPKDQDRVITDLFPNGFSPQILTDIQDDAVTL
GIKGVKREWTIDFSHSIGTNSLDYTVNNSNNASMGVASPTTFYAGGFLYSQNTSNLDLSK
SFEWRSGLNFSFGGELRVENYQIGAGEEASYIDGGSVFINENGEEVPRIAGAQVFPGIQP
DNELNKFRTNSSFYVDVEANVTDQWLVQGAARNENYNNFGNQIIWKLASRYKIYENTSIR
GGIATGFRAPSLHQVFFQNISTQFIDGDIVQVGTFNNESALTAQAFNVDKLRPELSNHYS
AGLSSKINDYLSVSLDYYYISIQDRIVLSGRIADGYESILDPFGVGAAQFFTNAIDTKTS
GFDASVVFKKSLGTGNIESYLGFNINKTKVGSDIRVPEAFEGAEEVIFNREEIGRLEKGQ
PGYKLSFRNFYDVQKLRVQLNNTLFGPVTYFHPEDGNSNNWVLNEFTGNIESRDQKFSPK
IITDLSIDYQFSSRVRAAIGGNNILNVYPDKHTHSSNTSNGNFIYSRRVGQFGVQGANYF
IKVAVKL
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaatgttatagctataatgcctaagtatactaagtccttactatttcttttcttt
ataatttcaacagtaagttatagtcaaactagagcaaaaattgttggtgtagttacagat
aattatggcgtgcttcctggagcattagtctcaatagagggctataataaatcaacacaa
acagatatagatggagcctttagttttgaagtagatgagggagagtatgtcttatctgcg
agttttgtaatgtataatgtacagtacaacaccgtcgttttaaaagcgggggatattaag
gagattaattttaaactagaaactggtttttcggcagatgagcctatttctcttggtact
agatcagacccagtctcttcgtttcaaaacacagcctctgtagatattatttcgccacag
caaatttctaattctccgcaaatagagcttagccagatccttcattatctcgctccttca
ttttattcaacacatcaaaccatagcagatggtacagatcatatagaccctgcaacactt
cgtggtttaggtacagatcaagtacttgtattaattaatggtaagagaaggcataatagc
tcattacttaatgtaaacggcacaataggtagaggagctgtaggaacagattttaatgcg
ataccagtaagcgctattgaaagaatagagattttaagagatggggcaacttctcagtat
ggatctgatgctattgctggtgtaatcaatatcgtattaaagaaacagaccaatgcaatc
acacttgataatttagtaaaaattaatcaagagggtgatggtcttactcagtttgcggga
gcaaattttgggatgaaaataggcaaagaaggatttttaaatctaaccggagagtacaga
aagagggaggcaacaaaccgagctggtaattatacaggcagtgtttatgtagataacgca
gaagaagacgctagtctcattgaggaaaatgatttttatactcaaacaggttactcagac
agaagggttatgcaaataggaaatgctgagactcaaaatctcgcaattcattttaacggc
gagattaaagtctcagatagtgcgaaggtttatcttaatggtggtagaaattatagagaa
ggaaagagtgctggtttttatagatttccaaaagatcaggaccgtgtgataacagattta
tttcctaatggattttcgcctcaaattcttacagatattcaagatgatgcggttacgcta
ggcataaaaggggtaaaacgtgagtggactatagactttagccattctataggtacaaat
tctctcgattatacggttaataattctaacaatgcatctatgggtgtggcttcacctaca
actttttatgctggagggtttttatatagtcaaaacacatcaaatctagatctatctaag
tcttttgaatggcgttctgggcttaatttttcttttggaggtgagcttagagtagaaaat
tatcagataggcgcaggagaagaagcctcttatatagatggaggaagtgtctttataaat
gaaaatggagaagaagtacctagaattgctggagctcaagtttttcctggtatacagcca
gacaatgagcttaataagtttagaacaaatagctctttttatgtagatgtagaggcaaat
gttacagaccaatggctagtacaaggagcagcgagaaatgaaaattataataacttcggg
aatcaaattatctggaaactcgcctcacgttacaagatatatgaaaataccagtataaga
ggaggcatcgcaacaggctttagagcaccctcattacatcaagttttttttcagaatata
agcacacaatttatagatggagatattgtacaagtgggtacatttaataatgagagtgcc
cttaccgcacaggcttttaatgtagataagttaaggcccgaactctctaaccactatagc
gcaggcttaagtagtaagattaatgattacttatctgtctcgctagactactattatatt
tctatacaagatagaattgttctctctggtagaattgcagatgggtatgaaagtatatta
gacccttttggagtgggagcggcgcagttctttacaaatgctatagacacaaagacttca
ggttttgatgcttctgtagtatttaaaaaatcattgggaactggaaatatagaaagctac
ttaggtttcaacattaataaaactaaggtgggaagcgatattagagttccagaagctttt
gagggggcagaagaggttatttttaatagagaagaaataggacgccttgaaaaaggacaa
ccgggttataaacttagttttagaaatttttatgacgttcaaaaactccgtgttcaactt
aataacacattgtttgggccagtaacgtatttccatccagaagatggcaactcaaataat
tgggttctcaatgagtttactggcaatatagagtcaagagatcaaaaattctcaccaaag
attattacagacctttctatagattatcagttcagctctagagtaagagcagcgatagga
ggaaataacatcttaaatgtgtatccagataagcatacccattcttcaaatacaagtaat
ggcaactttatttatagtaggagggtaggtcagtttggtgttcagggagcaaattatttt
attaaagtcgctgtgaagctgtaa
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