Dokdonia sp. MED134: MED134_08176
Help
Entry
MED134_08176 CDS
T03275
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dok
Dokdonia sp. MED134
Pathway
dok03030
DNA replication
dok03430
Mismatch repair
dok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MED134_08176
03430 Mismatch repair
MED134_08176
03440 Homologous recombination
MED134_08176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dok03032
]
MED134_08176
03400 DNA repair and recombination proteins [BR:
dok03400
]
MED134_08176
Enzymes [BR:
dok01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MED134_08176
DNA replication proteins [BR:
dok03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MED134_08176
DNA repair and recombination proteins [BR:
dok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MED134_08176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
EAQ39452
LinkDB
All DBs
Position
1847951..1848640
Genome browser
AA seq
229 aa
AA seq
DB search
MSLFSKNNDSLPEFWIKYLDAFAKEKKEKRFFKKTADSKGLQNTRFVVFDTETTGLDYKK
DRILSLGGVAVVGNQVIVADTLELFLKQDFYNPDSAQIHGILKQGNYLKVNEKEAIAQCL
DFIGTDILVGHHVGFDVAVVNQSLKRAGLGRLKNRQLDTEILYKRLVHPVNRPLQDKRYT
LDELAEALKIPLHDRHTAAGDSLITALAFIKIVHKLNSDGEMKLKHLFR
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtccttattctcaaaaaataatgactcactaccagagttttggataaaatatcttgac
gctttcgcgaaagaaaaaaaggaaaaacgcttctttaaaaaaaccgcagacagcaagggt
ttacaaaacacaagatttgtagtttttgatacagagaccacgggtttagattataaaaaa
gatcgcattctttccctaggtggtgttgctgtggtaggcaatcaagttattgtggcagac
acgctcgagctatttttaaaacaagacttttacaatccagacagcgcacaaatacacggg
atcttaaaacaaggcaattacctcaaggttaatgaaaaagaagccattgcccagtgtcta
gattttataggcacagatattctggtagggcatcacgtaggctttgacgtagcagtggta
aatcaatcacttaagagagctgggctaggcaggctaaaaaacagacaactcgatacagag
attttatacaagagactagtacacccagtaaacagacctctacaagacaaacgctacacc
ctagatgagcttgccgaagctcttaaaataccactacacgacaggcataccgcagcggga
gactctttaatcacggcgcttgcttttataaaaattgttcataagctcaacagcgatggc
gagatgaaattaaaacacctttttagatga
DBGET
integrated database retrieval system
