Dokdonia sp. MED134: MED134_08456
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Entry
MED134_08456 CDS
T03275
Symbol
gspD
Name
(GenBank) general secretion pathway protein D
KO
K02666
type IV pilus assembly protein PilQ
Organism
dok
Dokdonia sp. MED134
Brite
KEGG Orthology (KO) [BR:
dok00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
dok02044
]
MED134_08456 (gspD)
02035 Bacterial motility proteins [BR:
dok02035
]
MED134_08456 (gspD)
Secretion system [BR:
dok02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
MED134_08456 (gspD)
Bacterial motility proteins [BR:
dok02035
]
Pilus system
Pilus assembly proteins
MED134_08456 (gspD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Secretin
Secretin_N
Motif
Other DBs
NCBI-ProteinID:
EAQ39508
LinkDB
All DBs
Position
complement(1896273..1898459)
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AA seq
728 aa
AA seq
DB search
MIKKYVVSMFFVFTTHLLFAQQYDEGRIQQLENKLTAISSDIPGLSEKLDITMQQANLST
FLLAISEVHTVNIDVSPDLQGIQIINNFKDVLVSDVLVYLCKNYNLKIDFTGTILYIDRV
KEEKEEETEKEILVSYSPNNQLVSADLQNDNLSRAFKTISDLSGKGIFYTPELKDKSLSV
FIKDLPFDIAMEKIAYSNNLVVSQSKDGSYEFESAVTKAPGGPGGVTTSRPAKSRRSNFF
FEVINLKEKRINVDIQNIAIADIIYDIGNELKIDIFTASPLETAGRVTVTAKDISFDQLL
TKIFENTTLSIQSANKQVLTSSPNRPAVNGQQVASTAKRFTFKKDGNIYYFGTFKQLTLR
ASEVVPLRFRSISILADPQSSGRSAGRSGLNYGRNSNFVNGGSIRNNNQNTNVNFNNQSN
TQLTGQSSQNQNNTDLGSLIPQDVKQDLNIIVDKELNSFIVSGASADIKRFKEFIQDIDK
QVPIVIIEVMILEVSKNSTLDAGIEWGIGQEPSVTQGNIFPNTNLSLGASTINRILGRID
GSSFFNIGQVGPNFFATIRASETNGNFNIKSSPRITTLNGHRAYFSNGRTSYYEITQNQF
VGVQNPVVSESVDYVPIDAELSLEVLPFVSEDGEVTMDIKVIQSSFSGERVTENGPPEIS
SREFTSIIKSRTNDIVVLGGLEEDSKNNSGSGVPFLARIPIIKWLFSKRVRTASKSKLTV
LIKPTVIY
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaaatatgtagtgtcaatgttttttgtgtttacgacacatttattatttgca
cagcaatatgatgagggtagaatacaacaattagaaaacaaactaacggcaatttcttca
gatatccctgggctctctgaaaagcttgatattacaatgcagcaagcaaacttatctacc
ttcttgcttgccatttccgaagtgcatacggtaaatatagatgttagcccagatttacaa
ggaattcaaataatcaataattttaaagatgtattagtctctgatgtgctcgtttattta
tgcaaaaactataatcttaaaattgattttacaggtaccatactctatatagatcgtgtt
aaagaagaaaaagaagaagaaacagaaaaagagattctagtatcttatagtcccaataat
caactagtgagcgcagatttacaaaacgataatttgagtcgtgcgtttaagactatttct
gacctttctggcaaaggtattttttataccccagagttaaaggataaatctctttcggtc
tttataaaagatttaccatttgatattgctatggagaagatagcttattcaaataatctt
gtggtttctcaatctaaagatggatcatatgagtttgagtctgccgttacaaaggcccct
gggggaccaggtggtgtaacaacatcgagaccagcaaagtctagacgatcaaatttcttt
tttgaggttattaatcttaaggaaaagcgtataaatgttgatattcaaaatatcgcaatt
gcagatattatatatgacataggtaacgagttgaaaattgatatttttactgcttctcca
ttagaaacagctggaagagtgacagtaactgcaaaagatatttcttttgatcagttactt
acaaagatatttgaaaacacaaccttatcaattcagagtgcaaataagcaggtgttaaca
agtagtccaaacaggcctgcagtaaacggtcagcaggtagctagcacggcaaaacgtttt
acttttaaaaaagacggaaatatctattattttggaactttcaaacagcttacgcttagg
gcatcagaggttgtgccgctcaggtttcgctctattagtattctagcagatccacaaagc
tctggacgaagtgccggtcgatctgggttaaattatggacgtaattctaattttgtaaac
ggtggttccatcagaaataataatcaaaacacgaatgtgaattttaataaccagagtaat
acgcagctcactgggcaatcatctcaaaatcaaaataacacagacttagggtcacttata
cctcaagatgtaaaacaagatttaaatattatagtagataaagaacttaatagctttatt
gtatctggggctagtgcagatattaagcgttttaaagaatttatacaagatatagataag
caagtgcccatagtaatcattgaggtaatgattctagaagtaagtaaaaactcaactctc
gatgctggcattgagtggggtattggtcaagagcctagtgttactcaaggaaatattttt
ccaaatacaaacttgtcattaggggcaagcactatcaatagaattttaggtagaatagat
ggttcaagtttttttaatattgggcaagtaggacctaatttttttgcaaccataagagcg
tcagaaactaacggaaattttaatatcaagtcatcaccacgaatcaccacattaaatggt
catcgcgcctatttttctaacggaagaactagttattatgaaattactcaaaatcaattt
gtaggtgttcaaaatcccgtagttagtgagagtgttgattacgtgcctatagatgcagag
ctttctttagaagttttaccatttgtctcagaagacggtgaagtgactatggatattaaa
gttatacaatcaagttttagtggagagcgtgttacagaaaacggacctccagagattagt
tctcgggagtttacttccattataaagtcaagaacaaatgatatcgttgtattaggaggt
ttggaagaggatagtaagaataactccggctctggagttccctttttagctcgtattcct
attataaaatggctatttagcaagcgtgttcgtactgcttcaaaatcaaagttgacagtt
ttaattaagccaacagtgatatattaa
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