Dokdonia sp. MED134: MED134_08876
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Entry
MED134_08876 CDS
T03275
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
dok
Dokdonia sp. MED134
Pathway
dok02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dok00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MED134_08876
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dok02000
]
MED134_08876
Transporters [BR:
dok02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
MED134_08876
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
oligo_HPY
AAA_22
AAA_21
AAA_29
RsgA_GTPase
nSTAND1
AAA_16
TniB
ABC_ATPase
MMR_HSR1
NB-ARC
AIG1
ATP-synt_ab
AAA_23
AAA
SLFN-g3_helicase
Pox_A32
Motif
Other DBs
NCBI-ProteinID:
EAQ39592
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Position
1999143..2000831
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AA seq
562 aa
AA seq
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MQSQELLSVKQLHLSFRQQGEVNEVIHGISFDLYRNEILAIVGESGSGKSVSSLAILGLL
PKKHTHIEGLISFNGQSLTTLSEKDFQTIRGNEISMIFQEPMSSLNPSMRCGDQVAEILR
RHTTLSRKRIKDEVLALFEKVKLPTVSKIYEAYPHEISGGQKQRVMIAMAIACKPKILIA
DEPTTALDVTVQKEIILLLKQLQQETEMSVIFISHDLSLVSDIADRVLVMYKGDIVETAE
AQQLFKSPQHQYTKALLSARPSLDERLKKLPTIQDYLDNKTLSQVETADERFAHLKELYE
QPPLLEVHNVEKTYFSNSGIFTKAEGFKAVDDVTFKIYEGETLGLVGESGCGKSTLGNAI
LQLDRATAGHILYKGTDITRLRGKALRSLRKEVQIIFQDPFASLNPRLTVGQAIIEPMEV
HKLYASTKERKERVMQLLERVGLEKEHYNRYPHEFSGGQRQRIGIARTIAVNPKLIVCDE
SVSALDISVQAQVLNLLNELKKDFGFTYIFISHDLAVVKYMSDQLVVMNNGKIEEIGDAD
AIYKNPIKAYTKRLIGAIPKGI
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctcaagaacttctttctgtaaaacagcttcatctatcttttcgacagcaagga
gaggtcaatgaagtgatacacggtatctcttttgatttataccgtaatgagatacttgcc
attgtaggagaatctggttctggaaaaagtgtttcttcactagccattttaggtttactt
cctaaaaaacatactcacatagaggggcttatctcatttaatgggcaatcactaaccaca
ctttctgaaaaggattttcaaaccatacgagggaatgaaatctctatgatttttcaagag
cctatgagcagccttaatccttctatgcgctgcggagatcaagtagcggagattttaaga
aggcatactacgctttcgcgaaagcgtataaaagacgaagtactagctttatttgaaaaa
gtaaaactccctacagtatcaaaaatttatgaggcttatcctcacgaaatttctggaggc
caaaaacaacgagtaatgattgcaatggccattgcttgtaagcctaaaattctcattgca
gatgagcctacgacggcactagatgtcaccgtacaaaaggaaattattttacttcttaaa
cagctacaacaagaaaccgagatgagtgtgatttttatatctcacgacttatcgctagta
agtgatattgcagatcgcgtacttgtaatgtacaaaggtgatatagtagaaactgcagaa
gcacaacaactctttaagtcacctcaacatcaatacacaaaagcattactaagcgcaaga
ccttcacttgacgagcgacttaaaaagcttcccacaatacaagattacctcgataataaa
acactatctcaagtagaaacagcagatgaacgatttgcacatcttaaagagctttatgag
caacctccacttctagaagttcacaatgtagaaaaaacttatttttctaatagtggcatc
tttaccaaagctgagggctttaaagcagtagatgatgttacttttaaaatctacgaagga
gaaacgctaggtctagtaggtgagtctggatgtggaaagtctacgctagggaatgcgatc
ttgcaactggaccgagcaaccgcaggtcatattttatataaaggaacagacattacacgt
ttacgtggcaaagcgctacgtagtttacgtaaagaagtgcaaatcatttttcaagatcca
tttgcttctctaaaccctaggcttaccgtgggtcaagctattatagaacctatggaagtg
cacaaactatatgcctcgacaaaggagcgtaaagagcgagtgatgcaactattagaacgt
gtaggccttgagaaagaacactataatagatacccacacgagttttctggaggacagcgc
cagcgcatagggattgcacgtaccatagctgtaaatccaaaacttattgtgtgtgatgag
tctgtaagcgcgctagatatctctgtacaagcgcaagtactcaatttacttaatgagctc
aaaaaggactttgggtttacttatatttttatttctcacgatctcgcagtagtaaaatat
atgtctgaccaacttgtggttatgaataatggtaaaatagaagaaataggagatgcagat
gcaatttataaaaaccccataaaggcctacactaagcgattaataggtgctatacctaaa
ggcatctag
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