Dokdonia sp. MED134: MED134_09106
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Entry
MED134_09106 CDS
T03275
Name
(GenBank) UvrD/REP helicase
Organism
dok
Dokdonia sp. MED134
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
AAA_30
AAA_11
eIF3_subunit
L_protein_N
Motif
Other DBs
NCBI-ProteinID:
EAQ39638
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Position
2049280..2052417
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AA seq
1045 aa
AA seq
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MTEKNTFIVLNASAGSGKTYSLVKQYITTLLKSKDPNKFRHLLAITFTNKAVAEMKNRVL
ETLKAIGDYKQGDKPDMLDDLASASNLPVDEVVHKSKEILNRILHNYAAFDIVTIDTLTH
RIIRTFAKDLNISSSFEVSLDQKTLSAQAVDALVAKVGVDDTITKVLVDFALEKADDDKS
WDISRDLLEIASLLHNENDLKALELLKSKSLSDFDELATFLNTQIKSLASKQQEMGESLL
DFIHTLGLDQKSFASGYYYKFIVQVASGIKGLKYSGSGYKDNIEEYAFYTKGQKDDIKSI
IDANRNRFVDDFLKLKSLASQQKKYEAFRSKLIPLSVLHLIKKELDLIKEEENVLLISDF
NALISKSLKDQPAAFLYERLGERYTNYFIDEFQDTSVMQWDNLVPLIDNTISSASSDEVS
NSLLLVGDPKQAIYRWRGGEAEQFIALSHQINPFTTEATVARLDTNYRSNESIIHFNNSF
FTHLAVHFDNELYSEIYKTDNAQGTTSKKNGYVSLEFIDYENNTEADLLYPERILEIIKN
VTSQGYLHSDICILTRSNKHGTHIAQVLQEAGTEVVSSESLLIENSPTVQFIHNFITMLS
FPKQLEYRLAVLYFLGAHYNIKDTHNFYSTHTASTLSEFLEQLKAFDVFIHLDYLKNLSL
YEYIEYVIRSFYLAPISDAYVVAYLDLAYNYAQAHSGGVLGFIDYWEEKREKASIVAPAQ
DNAVQIMSIHKSKGLEFPVVIYPYADSDLYRTRGEHQWFPMENEDINGFNTLMVPHNNAL
NDFGEAGTALFEKRNNEQQFDTINVLYVALTRASERLYVLSRFRESVKKIGSYSDLFIDY
LQNNNLWNNDQREYSFGSKTAAIKKNKTSDYQNFTPTIRSTAKEELGIQIITQASFLWDE
KKQNAITYGNLIHELMAAVTNHNTITAVVDDAVRHGIIPQESRKVMTGIMNQVVSHPDLK
LFFEEENTVYNERMILASDGRFYIPDRVVVTPDGSTMIIDYKTGAHNDSYAKQLATYAGL
YQEMGYDVTHKLLVYIDSTIEVVAV
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaagaatacatttattgtgctcaatgcctctgcaggatctggtaaaacatat
agtcttgtaaagcaatacatcactacgcttcttaaaagtaaggatcccaataagtttaga
catttacttgcaatcacttttacaaacaaggcagttgccgagatgaaaaacagagtgctc
gaaactcttaaagccataggtgattataagcagggtgataaaccagatatgctagatgat
ctggctagcgctagtaacttgccggtagatgaggtggtgcataaatcaaaggagattctc
aatagaattttacataattatgctgcttttgatattgttacgattgatacacttacgcat
agaattatacgcacctttgcaaaagatcttaatatctctagcagttttgaagtgtctcta
gatcaaaaaacgctcagcgcacaagctgtagatgctcttgttgcaaaagtgggtgtagac
gacaccattactaaggtactcgtagattttgctcttgaaaaagcagatgatgataagagc
tgggacataagtagagatttactagaaattgcctcgctattacataatgaaaatgatctc
aaggcgctagaacttcttaaaagcaaatcattatcagactttgatgagcttgctacattt
cttaacactcaaattaagtctctggctagcaaacagcaagaaatgggtgaaagtctttta
gactttatacacacattaggtctagatcaaaaaagttttgccagcggctattactataag
tttatagtacaagtggctagtggcataaaaggtctaaaatattctggctcgggttataaa
gacaatatcgaggagtatgcattttacacaaagggacaaaaagatgatataaaatctata
atagatgcaaatagaaatcgctttgtagacgactttttaaaactaaaatctcttgcctcg
cagcaaaagaagtatgaggcttttcgctctaagcttatacctctttctgttttacacctt
attaaaaaggagctcgaccttattaaggaagaagaaaatgtattgctcatatcagatttt
aatgccctcatttcaaaatcgcttaaagaccaacctgctgcatttttatatgagcggctc
ggtgagcgatatacaaattactttatagatgagtttcaagatacctctgtgatgcagtgg
gacaatctcgtcccacttatagataatacgataagtagcgcctctagtgatgaagtaagc
aattctttattactcgtaggtgatccaaaacaagctatatatagatggcgcggtggtgag
gcagagcagtttattgctcttagccaccagattaatccttttactacagaggctaccgtg
gctcgtttagatactaactatagaagtaatgagtctattatccattttaataatagtttt
tttacacaccttgccgtacactttgataatgagctctatagtgagatttataaaacagat
aatgcacaaggcacaactagcaaaaagaatgggtatgtatctctagagtttattgattat
gaaaataataccgaagcagatctactctaccctgagcgcattctagaaatcataaagaac
gtcacttcacaaggctatttacatagtgatatttgtatacttaccagaagtaataaacac
ggtacacacattgctcaagttttacaagaggcaggtacagaggttgtctcctcagagagt
ttacttatcgaaaattctcctaccgtgcagtttatacacaactttatcacaatgctttct
tttccaaaacagttagagtatagacttgctgtactttactttttgggagcacattataat
ataaaagacacccataatttttacagtactcatacggctagcacattatcagaattttta
gagcagctcaaagcttttgatgtttttatacatctcgattacttaaaaaacctctctctt
tatgagtatatagagtacgttatacgctccttttacttagctccaatatctgatgcatat
gtagtggcatacctcgatctggcttataattatgctcaagcacacagtggtggtgtttta
ggttttatagactactgggaagaaaaaagagaaaaagcaagtatcgtagcaccagcacaa
gacaatgctgtgcagataatgagtattcataaatcaaaagggcttgagtttccagtagtt
atatatccttatgcagactcagacttgtatcgcactcgtggcgagcaccagtggttccct
atggaaaatgaagatattaatggttttaacactttaatggtcccacataataatgcgctt
aacgattttggagaggcaggtactgctctttttgaaaaaagaaataatgagcaacaattt
gacaccattaatgttttatatgtggcgcttactagagcttctgagcggttatacgtgtta
tcacgctttcgcgaaagcgtaaaaaaaataggttcatatagtgacctttttatcgattat
cttcaaaacaacaatttgtggaataacgaccagcgagaatatagttttggcagcaaaaca
gccgctattaaaaaaaacaaaacttctgattatcaaaattttacacccaccattcggtct
acagccaaagaagagttaggtatacaaataattactcaggctagttttttatgggatgag
aaaaagcaaaatgcaattacttacggtaatctcatacacgagttaatggccgctgttaca
aaccacaatacgattacagccgtagtagacgatgctgtgcgccacggtatcatacctcaa
gaaagccgaaaggttatgacgggcataatgaatcaggttgtctcacatccagacctaaag
ttattttttgaagaagaaaacaccgtttataatgagcgtatgatactggctagtgatggt
cgtttttacatacctgatcgtgttgtagttactccagacggaagtactatgattatagac
tataaaacgggtgcccataacgactcttatgcaaaacaacttgcaacctacgccgggtta
tatcaagagatgggttatgacgtaactcataaactgcttgtttatatagacagcacgata
gaagtagtcgcggtttaa
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