Dokdonia sp. MED134: MED134_09116
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Entry
MED134_09116 CDS
T03275
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
dok
Dokdonia sp. MED134
Brite
KEGG Orthology (KO) [BR:
dok00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dok02000
]
MED134_09116
Transporters [BR:
dok02000
]
Other transporters
Pores ion channels [TC:
1
]
MED134_09116
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
TSP_3
Motif
Other DBs
NCBI-ProteinID:
EAQ39640
LinkDB
All DBs
Position
2053756..2055168
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AA seq
470 aa
AA seq
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MKHLSRFLVAALMILALGSVNAQDANNPWAISVGANAIDTYPVGDAIREAGTNLEMRGNL
FEEFYNVEDHWSIVPSVSYVNVSRYLGDGFTFGVSGSLNRIDKLGDSRPRNELQYYGADG
DFSYSLRDLINGEGGWFDPSLSVGAGYTWVESSLDGELGGFGTANAAAGVKIWLGENFNI
GLQSKYKHAFEDDGIKHFQHVAAVGIVFGGKDTDGDGIYDKDDACPEVAGLPEFDGCPDS
DGDGIQDSKDACPTVAGLAEFDGCPDTDGDGIPDPKDACPTVAGIAALGGCPDADGDGIK
DADDNCPNEAGPRANNGCPYQDKDGDGVLDKDDECPDVAGTVANNGCPEVSVEVLNDLNV
ETKKVLFDYNKASIRTESYATLDKVASVMMEYPTTRFLIEGHTDDRGRDAYNLDLSDQRA
ASVRSYLTGKGIPASRLESKGFGEARPVASNKTAAGRQENRRVELSILEQ
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatcttagcagatttttagttgcagcacttatgattcttgctttaggatcagtg
aatgcacaagacgcaaacaatccttgggctatctcagtcggagcaaacgcaattgacaca
tacccagtaggtgacgcaattcgtgaggctggtactaaccttgaaatgagaggaaactta
tttgaagaattttataatgttgaagatcactggagcatcgtaccttcagtttcttatgta
aacgtttctcgctacttaggggatggtttcacatttggagtatctggttcattaaacaga
attgacaaattaggagattcaagaccaagaaatgaattacaatactacggagctgacgga
gatttctcttatagcttaagagaccttatcaatggtgaaggtggatggtttgatccttct
ctttctgttggtgctggttatacgtgggtagaaagttcactagacggtgagttaggtgga
tttggaactgcaaatgctgctgccggagttaaaatttggttaggagaaaacttcaatatt
ggtttacaatctaaatataagcacgcttttgaagatgacggaatcaagcactttcaacac
gttgctgctgtaggtattgttttcggaggaaaagatacagatggtgatggaatatatgac
aaagatgatgcttgtccagaagtcgcaggtcttcctgagtttgacggatgtccagattct
gacggtgacggtatccaagattctaaagatgcttgtcctactgttgctggtttagcagag
tttgatggttgtcctgatacagatggtgatggtattcctgatcctaaggatgcttgtcct
actgttgctggtatcgctgctttaggtggttgtccagatgcagatggtgatggtatcaaa
gatgctgatgataattgtccaaatgaggcaggaccacgtgctaacaacggatgtccttac
caagataaagacggtgacggtgtattagataaagatgatgagtgtccagacgttgcagga
actgtagcaaacaatggatgtccagaagtatctgtagaagttcttaatgaccttaacgtt
gagactaaaaaagtactttttgattacaacaaagcatcaatcagaactgaatcttatgcg
actcttgataaagtagcatcagtaatgatggagtacccaacaactcgtttccttatcgaa
ggtcacactgatgatagaggacgtgatgcatataacttagacctttctgaccagagagct
gcttcagtaagaagctacttaacaggaaaaggaatcccagcgtctcgtttagagtctaaa
ggatttggtgaagctagaccagttgcttcaaataaaactgctgctggacgtcaagaaaac
agacgtgttgagctttctattctagagcaatag
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