Dokdonia sp. MED134: MED134_09396
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Entry
MED134_09396 CDS
T03275
Name
(GenBank) O-antigen polymerase
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
dok
Dokdonia sp. MED134
Pathway
dok00540
Lipopolysaccharide biosynthesis
dok01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dok00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
MED134_09396
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dok01005
]
MED134_09396
Enzymes [BR:
dok01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
MED134_09396
Lipopolysaccharide biosynthesis proteins [BR:
dok01005
]
Core region
MED134_09396
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
DUF4407
Motif
Other DBs
NCBI-ProteinID:
EAQ39696
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All DBs
Position
2115524..2116753
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AA seq
409 aa
AA seq
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MEAKTHNKSLVYLEGALFLLFASILLPTNIKSIAVGLFCAVSVYHFFKSKNTFNTRFFLV
NAAVYFLIAITLIYSDNIAYGARKLTSFLSLLLFPLCFALFSRNDMKYLYSRLEKFLGVY
LVTVVLFNVIPFLWFYITHYSFSDMLIHFPTVMRVDVGKYGIHPIYLSMHCSVAILFSMF
ILRSLKSKWKIVGVLLLDAILILFLLLYAKKGPILALMIVSTLFILFQRKRAIVRPYIFA
ILGLVILMIAIPRTRNKFLELQKIEVIGEGGPTSTNIRYTIYGVAKELIYESPILGYGIG
DYRDVLNKKYETTGNSVLKEGRYNTHNQFLSLLTIGGVILLLAFLGTLSINLVFATRFNN
ELFILVLLFYGIVMLTTNILEREAGVIYFALFFNFLSAKTLFVNPSDVS
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaaaaacacataacaaaagcttagtgtatctagaaggagctttgtttcttcta
tttgcatcaatactgttacctacaaatataaaatctattgctgtggggttattttgtgct
gtctcggtttatcattttttcaaaagtaaaaacacatttaacactcgcttttttttagta
aatgctgcggtttattttttaatagcgataacacttatttacagcgataacatcgcctat
ggagcaagaaagcttacctcttttttgtcattactattgtttccgctctgttttgccttg
ttttcaagaaacgatatgaaatacctctactctaggttagaaaaatttctaggggtatat
cttgtgaccgttgttctttttaatgtgattccgtttttatggttttacattacacattat
agttttagtgatatgctcattcattttcctactgtgatgcgtgttgatgtgggtaaatat
ggtatccaccctatttatctctcaatgcattgtagtgtggcaattttattttcaatgttc
atattgcgctccttaaaaagtaaatggaaaatagtaggagtcttattacttgatgcaata
ctcattttgttcttactgctgtatgcaaagaaggggcctattttagcccttatgattgtc
tctacactgtttatactatttcagcgcaaaagagcaattgtacgaccttatatttttgca
attctaggtcttgttatattgatgattgccataccacgcactagaaataagtttttagaa
cttcaaaaaattgaggtgattggtgagggaggacctacgtctacaaatattagatatact
atttacggcgtagcaaaagaactcatttatgaaagtcctattttggggtacggtataggt
gattatagggatgtgctcaataaaaagtatgaaaccacaggtaatagtgttttaaaagaa
gggaggtataacacgcataatcagtttttgagtttattaaccatagggggagttatatta
ttattagctttcttaggcacactatctattaatcttgtctttgcaacgcgatttaataat
gaactctttatactagttctgttattttatggcattgttatgttaactacaaatatttta
gagcgtgaggccggagttatttattttgcattattctttaacttcctttctgccaaaaca
ctttttgtaaacccctcagatgtctcataa
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