Dokdonia sp. MED134: MED134_10211
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Entry
MED134_10211 CDS
T03275
Symbol
phr3
Name
(GenBank) DNA photolyase/cryptochrome, animal cryptochrome and (6-4) photolyase subfamily
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
dok
Dokdonia sp. MED134
Brite
KEGG Orthology (KO) [BR:
dok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dok03400
]
MED134_10211 (phr3)
Enzymes [BR:
dok01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
MED134_10211 (phr3)
DNA repair and recombination proteins [BR:
dok03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
MED134_10211 (phr3)
Prokaryotic type
MED134_10211 (phr3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
EAQ39859
LinkDB
All DBs
Position
2278070..2279554
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AA seq
494 aa
AA seq
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MSKSKSHITVHWFKRDLRLQDNENLWQALQHSEPVILLYIFEPSLLDDEHYSERHFNFIK
ESLQDLQSRLENYDTKILVVQGEVIPVFKKLQQHYTIKRVYSHVETGIRKTYDRDIAFKV
YQQSQDIRWIQFINNGVRRSLSNRVGWVQGWEWWMTEPQRIFVPQSGDLVTKKEVEVFEQ
YFDCVSLQTPENTAFQKGGTTMGLRYYDSFLRDRIKNYNAHISKPLLARKSCSRLSPYIA
WGNLSVREVWQRAKKLRQASPYKRQIDGFTSRLRWSAHFIQKFEMEDTMEFVSVNRGFHS
LKKVSNPVYAKAWQEGKTGYPLVDACMRCLVETGYLNFRMRALTLSFFTHNLWQPWQDAS
AFLARQFLDFEPGIHYPQIQMQAGETGINMLRIYNPVKNSYEHDPEGEFIKKWIPELREV
PLSYIHEPWTMSLLEQQFCNTTIGKDYPAPIVNIKETQKYATDTMWKYKERPAVKQDAVR
ILKRHTLVDRQVWD
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaaaagtaaatcacatatcaccgtacactggtttaaaagagacctaagactacaa
gataatgaaaacttgtggcaggcacttcaacatagtgaacctgtaatattgctatatatc
tttgaaccttctttactagatgatgagcattatagtgagcgacattttaattttataaaa
gagtcacttcaggatttacaaagcagattagaaaattatgacaccaagatacttgttgtt
caaggagaagtgatacctgtttttaaaaaattacagcagcattacaccataaaacgggtc
tattctcacgtagaaactggaattcgaaaaacctatgatagagatattgcatttaaggtc
taccagcagtctcaagacatacgatggatacaatttataaataatggagtaaggcgtagc
ttaagtaacagagtaggctgggtacaaggctgggaatggtggatgactgagccacaacgc
atttttgtgccgcaaagcggagaccttgttacaaagaaagaagtagaggtctttgagcag
tattttgattgtgtctctttacaaacaccagaaaatacagcatttcaaaaaggaggcact
acaatgggactgcgttattatgatagctttttgagggacagaatcaaaaattataatgct
catatctcaaaacctttactagccagaaagagttgtagtcgcttgtctccatatatagct
tggggtaacctgtcggtgcgcgaagtatggcagcgggcaaaaaagctgcgacaagcctca
ccttacaaaagacagatagatggttttacctcacgccttaggtggtctgctcattttata
cagaagtttgagatggaagatacaatggagtttgtaagtgtaaatagaggcttccatagc
ttaaagaaagtgtctaacccagtctatgcaaaggcttggcaagagggtaaaacaggttac
ccgctagtagatgcttgtatgagatgccttgtagagacgggttatctcaattttagaatg
agagcgcttacgttgtcattttttacacacaacttgtggcaaccctggcaagatgcatca
gcatttcttgcgaggcaatttttagattttgagccaggtatacactacccgcaaatacaa
atgcaagctggagaaaccggtattaatatgttgcgtatttataaccctgtaaaaaacagt
tatgaacacgacccagaaggagagtttataaaaaagtggattccagaactacgtgaagta
ccgctgtcatacatacacgaaccgtggacgatgagcctcctcgagcagcagttttgtaat
acaactataggtaaggactacccagcgcctattgtaaatataaaagagacccaaaaatat
gctacagatacaatgtggaagtacaaagagcgtcccgctgtaaagcaagatgccgtgcgc
attttaaaacggcataccttagtagatagacaggtatgggattaa
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