Dokdonia sp. MED134: MED134_10540
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Entry
MED134_10540 CDS
T03275
Symbol
ruvC
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
dok
Dokdonia sp. MED134
Pathway
dok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MED134_10540 (ruvC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dok03400
]
MED134_10540 (ruvC)
Enzymes [BR:
dok01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
MED134_10540 (ruvC)
DNA repair and recombination proteins [BR:
dok03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MED134_10540 (ruvC)
RecFOR pathway proteins
MED134_10540 (ruvC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF460
Motif
Other DBs
NCBI-ProteinID:
EAQ38128
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Position
2352669..2353223
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AA seq
184 aa
AA seq
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MADEKIILGIDPGTTIMGFGLIKVVGKKMEFMQLNELLLQKYNDPYVKLKLIFERTIHLI
DTYHPDEIAIEAPFFGKNVQSMLKLGRAQGVAMAAGLSREIPITEYLPKKIKMAVTGNGN
ASKEQVARMLQSLLKLKTLPKNLDATDGLAAAVCHFYNSGKVEIGKSYSGWESFVKQNEK
RVKK
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
ttggcagacgaaaaaatcatattaggtattgatccaggaaccactattatgggttttgga
cttatcaaggttgtgggtaaaaagatggagtttatgcaactcaatgagttattgttacaa
aagtataatgacccttatgtgaagctcaaactcatttttgagcgcaccatacatcttata
gatacgtatcacccagatgagattgcgatagaggcaccgttttttggcaagaatgtacaa
agtatgctcaagctaggtagagcgcaaggagtggcgatggcagcaggtttatctcgagaa
atccctatcacagagtatcttcctaaaaagattaaaatggccgttactggaaatggtaat
gcaagtaaggagcaggtggcaagaatgctacagtctttactaaaacttaaaaccttgcct
aaaaacttagacgctacagatggtcttgccgcagcagtgtgtcacttttataattctgga
aaagtagaaataggtaagagttactcgggctgggagagctttgtaaagcaaaatgaaaaa
cgagttaagaagtga
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