Dokdonia sp. MED134: MED134_10865
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Entry
MED134_10865 CDS
T03275
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
dok
Dokdonia sp. MED134
Pathway
dok00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dok00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MED134_10865 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dok01007
]
MED134_10865 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dok03016
]
MED134_10865 (aspS)
03029 Mitochondrial biogenesis [BR:
dok03029
]
MED134_10865 (aspS)
Enzymes [BR:
dok01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
MED134_10865 (aspS)
Amino acid related enzymes [BR:
dok01007
]
Aminoacyl-tRNA synthetase
Class II (A)
MED134_10865 (aspS)
Transfer RNA biogenesis [BR:
dok03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
MED134_10865 (aspS)
Prokaryotic type
Other AARSs
MED134_10865 (aspS)
Mitochondrial biogenesis [BR:
dok03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
MED134_10865 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2d
DUF6478
MDHAR3-like_C
Motif
Other DBs
NCBI-ProteinID:
EAQ38193
LinkDB
All DBs
Position
complement(2428620..2430368)
Genome browser
AA seq
582 aa
AA seq
DB search
MYRTHNNGSLRAADVNKEVTLAGWVQKSRDKGFIIWVDLRDRYGMTQLVFDQERTDAALM
EEARKLGREFVIQVTGTVVERDSKNPNIATGDIELLVSKLEILNASLTPPFTIEDETDGG
EDLRMKYRYLDIRRKPVRESLIFRHRVALEVRKYLSEQDFIEVETPYLIKSTPEGARDFV
VPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMA
FVEQEDILNIFEGLTRHLLKEVNGVEIEKFPRMLYDDAMRLYGNDKPDIRFGMKFGELNE
VAQHKDFGVFNNAELVVGIAVPGGNSYTRKEIDKIIEWVKRPQVGALGMVYSRCNDDGSF
KSSVDKFYDQEDLAKWAEVTGAQKGDLVCILSGDTNKVRAQMSALRMELAERLGLRKPDE
FAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQIELLDTKPGEVKANAYDLVLNGNEI
GGGSIRIHDKETQAIMLRHLGFSEEEAKAQFGFLMDAFEYGAPPHGGLAFGLDRLVAILG
GQETIRDFIAFPKNNSGRDVMIDAPAPLDNEQLQELNLKLNN
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtacagaacgcacaataacggaagcctacgcgccgccgatgtaaataaagaagtaacc
ctagcaggatgggtacaaaaatctagagataaaggttttataatctgggtagatctacga
gatcgttacgggatgacacaacttgtttttgaccaagaacgtacagatgctgctcttatg
gaagaagcacgtaaactgggacgcgagtttgtaatacaagttactggtaccgtagttgag
cgtgattcaaaaaaccctaatatcgctactggagatatagagttattagtatcaaaacta
gagatacttaacgcttctctcactcctccttttacgatagaagatgagacagatggtgga
gaagacctacgtatgaagtatcgctacctagacatacgccgtaagccggtacgtgagagt
cttatctttagacaccgcgtggctcttgaggtacgtaaatacttatctgagcaagatttt
attgaagttgagactccttaccttataaaatctacaccagagggagcgcgtgattttgta
gtgccttctcgtatgaatgaaggacaattttatgcactaccacaatcaccacagaccttt
aagcaattgcttatggtgggtggtatggataaatacttccagattgtaaaatgttttaga
gatgaagatttacgtgcagacagacagccagagttcacacagatagactgtgagatggcc
tttgtagagcaagaagacattttaaacatctttgaaggacttactcgtcacttacttaaa
gaagtaaatggggtagagattgagaagttcccacgtatgctatatgatgatgcaatgcgt
ctgtatggtaatgataagccagacattcgttttgggatgaaatttggcgagctcaatgag
gtggcacagcataaagactttggcgtttttaataatgcagagcttgtagtaggtatagcc
gtaccaggaggtaactcttatactcgtaaagagattgacaaaattatagagtgggtaaaa
cgcccgcaagtaggagcgttaggaatggtgtactctcgttgtaatgacgatggaagcttt
aaatcttctgtagataaattttatgatcaagaagaccttgcaaagtgggcagaagtaact
ggagctcaaaaaggtgatctagtttgtatactctctggtgatactaataaagtacgtgca
cagatgagtgcactacgtatggagcttgcagagcgcttaggactacgcaagccagatgag
tttgcaccgctgtgggtcatagacttcccgctacttgagctagatgaagagacaggacat
taccacgcaatgcaccacccatttacatctccaaaacctggtcaaatagaattacttgac
acaaaacctggtgaagtaaaagcaaatgcctacgaccttgtacttaacggtaacgagata
ggtggaggttctatacgtatacacgataaagaaacacaggctataatgctacgtcaccta
ggcttttctgaagaggaggctaaagcacagtttggcttcctaatggacgcttttgagtat
ggagcacctccacacggtggtcttgcttttggactagacaggcttgtagctatactaggt
ggtcaagagactatacgtgactttattgctttcccaaaaaacaatagcggtcgtgatgta
atgatagacgctcctgctccacttgacaatgagcagctgcaagaattgaatttgaagctt
aacaactaa
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