Dokdonia sp. MED134: MED134_12041
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Entry
MED134_12041 CDS
T03275
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
dok
Dokdonia sp. MED134
Pathway
dok00300
Lysine biosynthesis
dok00550
Peptidoglycan biosynthesis
dok01100
Metabolic pathways
dok01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
dok00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MED134_12041 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MED134_12041 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
MED134_12041 (murF)
Enzymes [BR:
dok01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
MED134_12041 (murF)
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GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
EAQ38627
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Position
complement(2693058..2694332)
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AA seq
424 aa
AA seq
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MTIAELHFHFLDSNGVCTDTRSLEKNQIYFALKGENFNGNKFAQQALKSGASLAIVDEKE
YVTDRSVLVDDVLSTLQQLANYHRNYLDIPIIGITGSNGKTTTKELIYAVLSEQYNVIAT
KGNLNNHIGVPLTLLTMDASTEIGIVEMGANHQGEIKMLCEIAQPNFGYITNFGKAHLEG
FGGFEGVIKGKSELYNYLRENNELVFINDQDEIQVRQSANIVSKTFGSSQSEYPVYLEDG
SGNLKITVGETTITSNLIGTYNFSNIAVAMAMGNHFDVPLTHIKNGIEKYVPSNNRSQII
DKDTYKIILDAYNANPTSMAAALKNLQATGTNAIAFIGDMFEVGETSKAEHQAILDLAHN
LNISKVYAIGPDFGTSSPHPEQKVYGSYDAFAKAYSKQIPADTTVLIKGSRGMKMERILD
ILAS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgactatagcagagttgcattttcattttttagatagcaatggtgtttgtacagataca
agaagccttgagaaaaatcaaatttattttgcgctcaaaggcgaaaacttcaacggaaat
aaatttgcccagcaagcccttaaatctggagcgtctctagcaattgtagatgaaaaagaa
tatgttacagataggtctgtgcttgtagatgatgttttaagtactttacaacaacttgca
aattatcaccgcaactacctagacatacccatcataggcatcacaggtagtaacggaaaa
accactacaaaggaacttatttatgccgtgctgtctgagcagtacaacgttattgccaca
aaaggcaatctcaacaatcacataggggtaccactcaccctactaactatggatgctagc
acagaaataggtattgtagagatgggcgcaaatcatcaaggggagataaaaatgctgtgt
gagattgcacaacctaattttgggtatatcacaaactttggcaaagctcatctagaaggc
tttggaggttttgagggtgtgataaaaggtaaaagtgaactttataattacctccgagaa
aacaatgagctcgtctttataaatgatcaagatgagattcaagtacgacagtctgcaaat
attgtttcaaaaacctttggctcatcacaaagcgagtacccagtatatctagaagatggc
tcaggaaacttaaagattactgtaggtgaaaccacgattacaagtaatctcataggtaca
tataacttctcaaatattgctgtagctatggctatgggcaatcactttgacgtgccactt
acccacatcaaaaatggcatagaaaaatatgtgccgtcaaataatagatcacaaattatt
gacaaagacacatacaagattatactagacgcttacaatgccaacccgacaagtatggct
gctgcattaaaaaacctgcaagccacaggcacaaatgcaattgcatttataggagatatg
tttgaagtgggtgaaacctcaaaagcagaacatcaagccattttagaccttgcacataat
cttaacatctcaaaagtctatgcgataggcccagattttggaacttcttctcctcaccct
gaacaaaaagtttatgggagttatgacgctttcgcgaaagcgtactcaaaacaaatacca
gcagacacaacagtacttataaaaggatcgcgaggtatgaaaatggagcgtatcttagat
attctcgcctcttaa
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