Dokdonia sp. MED134: MED134_12716
Help
Entry
MED134_12716 CDS
T03275
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine-D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
dok
Dokdonia sp. MED134
Pathway
dok00470
D-Amino acid metabolism
dok00550
Peptidoglycan biosynthesis
dok01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dok00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MED134_12716 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MED134_12716 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dok01011
]
MED134_12716 (murD)
Enzymes [BR:
dok01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
MED134_12716 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
dok01011
]
Precursor biosynthesis
Amino acid ligase
MED134_12716 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD_N
MurD-like_N
Motif
Other DBs
NCBI-ProteinID:
EAQ38032
LinkDB
All DBs
Position
2826008..2827345
Genome browser
AA seq
445 aa
AA seq
DB search
MKKRLVILGAGESGVGTAILGKAKGYDVFLSDFGKIKNHYKEILIAEDFAWEEEGHTEAL
ILNADVVMKSPGIPDKAPIVQKLIEKGVSVISEIEFASQYTDATIVGITGSNGKTTTTML
TGFILEQAGINLGVAGNIGDSYAKMVAQKEIDTYVLEISSFQLDGIADFAPHIAVVLNVT
PDHLDRYDYKFENYIASKFRIAMNQKETDYLIYDADDPVSVDWLNKHPVRSKLLPFSLTQ
EFENGAFIKDNNLVVQIDNNTFTMTTNNLALKGQHNKKNAMAASTVANLLNIRKATIRES
LEGFQGVEHRLEQVLKINNVQYINDSKATNVNATFYALDSMNDPTVWIVGGVDKGNDYRD
LYPLINEKVKAIICLGVDNQKLMSHFENMVDIIVETPSMTEAVKIAYKVAERGDNVLLSP
ACASFDLFDNYEDRGRQFKAAVRNL
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacgattagtcatattaggagctggagagtctggcgtaggtactgccatttta
ggcaaggccaaaggctatgacgtgttcttatctgattttggaaagataaagaatcactac
aaagagatactcattgctgaggattttgcttgggaagaagaagggcatacagaagcactt
attctcaatgcagatgtagtgatgaagagtcctggaataccagataaagcacctatcgtg
caaaagctaatagaaaaaggagtctctgtaatatctgagatagaatttgcttctcaatat
acagatgccacaattgtggggattaccggaagtaacgggaaaactacaaccacgatgctt
actggatttattctagaacaagcaggtattaatcttggtgttgcgggaaacataggagac
agctatgcaaagatggtggcgcaaaaggagattgacacctatgtgctagaaataagcagt
ttccagttagacggaatcgcagattttgctcctcatatcgcggtggtgctcaatgtgaca
ccagatcacttagatagatacgattataagtttgaaaattacatcgcatcaaaatttaga
atagcgatgaaccaaaaagaaacagattatctcatctatgatgcagatgatcccgtgagt
gtagactggcttaataaacacccggtgcgctcaaaattattgcccttttcactcacacaa
gaatttgaaaatggcgcttttataaaagacaataacctagtagtacaaatagataataac
acctttacaatgaccacaaacaatctcgctcttaaagggcaacacaacaagaaaaacgca
atggctgcctctacggtagcaaatttattaaacatccgtaaggcaacgatacgtgagagt
ttagaaggttttcaaggggtagagcataggttagagcaggtgctcaagattaacaacgtg
cagtacataaatgacagtaaggcgactaatgtaaacgctacattttatgcgctagatagt
atgaacgaccctacggtatggatagtaggtggagtagataagggtaatgattatcgtgac
ttatatccccttattaatgagaaggtaaaagcaattatctgtctaggtgtagataatcaa
aagcttatgagtcattttgaaaatatggtggatattattgtggaaacaccgtctatgaca
gaggctgtaaagatagcttacaaggtggcagagcgtggtgataatgtattgctttctcca
gcgtgtgcaagctttgatttatttgataactatgaggatagaggccgccagtttaaagct
gccgtacgtaacctttaa
DBGET
integrated database retrieval system
