Dokdonia sp. MED134: MED134_13961
Help
Entry
MED134_13961 CDS
T03275
Name
(GenBank) ABC transporter, periplasmic binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
dok
Dokdonia sp. MED134
Pathway
dok02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dok00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MED134_13961
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dok02000
]
MED134_13961
Transporters [BR:
dok02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
MED134_13961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
EAQ37851
LinkDB
All DBs
Position
complement(3097361..3098986)
Genome browser
AA seq
541 aa
AA seq
DB search
MKNTRSLLLNYSLLILCILSTIGCDKGDTSDRDHQVFRYNEQYQISTLDPAFARNPPIIW
PVNQLFNGLVQLDNDLNVQPDIAKSWEISQDALTYRFILRDDVRFHKHPAFNTKDSTRIV
TAADFVYSFNRLRDPKIASPGSWVLGNVASYSAVNDTTFTITLKKAFPAYLGLLSMRYCS
VVPKEVTTHYGNEFRSHPIGTGPFKFKRWEEGVKLVLRKNELYYEKDEDGVQLPYLEAVA
ITFLPDKQSEFLQFAQGNIDYLNSLDPSYKDEILTASGTLRAKYQDRVQFEKVPWLNTEY
IGFYLDSDTPEVQSALLRKAVNYGFDRKKMITYLRNGIGKPAVNGFIPKGIPGYDHIKGY
EYDGTLSRKLIAQYIKETGDTSPEITIGTNSQYLDICEYIQRELQKVGLKVNIDVMPPST
LRQMKSSGELDAFRASWIADYPDAENYLSLFYSKNFTPNGPNYTHFKSATYDSLYEHSLS
ITDIGQRKKLYRTMDSLIIDKSPIIPLYYDEVVRFTQKTISGFEPNAQNFLVLKYVKKQK
L
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaacacccgctcacttttactcaattattccttacttatactttgcatacttagt
actataggttgtgacaaaggtgatacgagtgatcgtgatcatcaagtttttagatataac
gagcagtatcaaatttctacactagaccctgcatttgctcgcaaccctcctataatatgg
ccggttaaccagctatttaatggtctggtacaactagataatgatcttaacgtacaacca
gatattgcaaagtcttgggaaatatctcaagatgcgcttacgtatagatttatactacgt
gatgacgtgcgatttcataaacaccctgcttttaacactaaagacagtacacgcatagta
accgctgcagattttgtttactcctttaatagactacgtgacccaaaaattgcctcacct
gggagctgggtattgggcaatgtggcaagttacagcgctgtaaatgacaccacatttacc
attacattaaagaaggcctttcccgcttatctagggttacttagtatgcgctactgctct
gttgttcctaaagaggttactacacattatggtaacgagtttagatctcaccccataggc
actggaccatttaagttcaaacgctgggaagaaggtgtaaaactagtcttacgtaaaaat
gagctctactatgaaaaagatgaggatggcgtccaactcccctatcttgaggcagtggct
attacatttttaccagataagcaaagtgagtttttacaatttgcacaaggcaatatagat
taccttaatagtttagatccatcatataaagatgagattcttaccgcttctggcacttta
agagcaaagtatcaagatcgcgtacagtttgaaaaagtaccgtggcttaatacagaatat
ataggcttttacttagacagtgacacgccagaggtacaatctgctttactacgcaaggcg
gtaaactacggttttgatcgtaaaaaaatgattacgtacctgcgcaatggtatcggcaag
ccggctgtaaatggttttatacctaaagggatacctggctatgatcatataaaaggatat
gaatatgatggtacgctttcgcgaaagctaatagcacaatacattaaagaaacaggagac
acatctccagaaatcaccataggcacaaatagccagtacctagacatctgtgagtacata
caacgagagttacaaaaggtaggtttaaaagtaaatatagacgtgatgcctccatctacg
ctacgacagatgaagagtagcggagagctagatgcctttagagcaagctggattgcagat
tatccagatgccgaaaactacttaagcttattttatagtaagaacttcacgccaaatgga
ccaaactacacgcattttaaaagtgcaacctatgatagtttatacgagcatagtttgagc
attacagatataggccagcgcaaaaaattatatcgcactatggattctcttattatagat
aagtcacctataataccactctattatgacgaggtggtgcgttttactcaaaaaacgatt
tctggttttgaacctaatgcgcaaaactttcttgtgttgaaatatgtgaagaagcaaaaa
ttataa
DBGET
integrated database retrieval system
