Dokdonia sp. MED134: MED134_13966
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Entry
MED134_13966 CDS
T03275
Name
(GenBank) MiaB-like tRNA modifying enzyme
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
dok
Dokdonia sp. MED134
Brite
KEGG Orthology (KO) [BR:
dok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dok03016
]
MED134_13966
Enzymes [BR:
dok01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
MED134_13966
Transfer RNA biogenesis [BR:
dok03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
MED134_13966
Prokaryotic type
Methylthiotransferases
MED134_13966
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
B12-binding
HIR3_2nd
Motif
Other DBs
NCBI-ProteinID:
EAQ37852
LinkDB
All DBs
Position
3099016..3100404
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AA seq
462 aa
AA seq
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MPTFFKAKQYTNIVQMSSTKKVAFYTLGCKLNFSETSTIARSFGKEGFDKVDFSEAADVY
VINTCSVTENADKRFKNIVKQAQKANPDAVKVAVGCYAQLKPEELAAVDGVDLVLGATEK
FNVTSYINDLLNNPDRARDGGEVHACEIQDADFYVSSYSIGDRTRAFLKVQDGCDYKCTY
CTIPLARGISRSDTLQNVLDNAAKIAAQDIKEIVLTGVNIGDYGKGEFGNKKHEHTFLEL
VQELDRVDGIERLRISSIEPNLLKNETIEVVSNSRTFVPHFHIPLQSGSNKILGLMRRRY
QRELYVDRVAKIKEVMPHACIGVDVIVGFPGETDEDFLETYNFLNSLDISYLHVFTYSER
DNTPAATMDGVVPKNVRSKRSKMLRGLSAKMRRAFYESQLDTKRTVLFESENKEGYIHGF
TENYVKVKAPWNPELVNQLHEVQLTSIDDDGMVRFDFVGVEA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttgcccaccttttttaaggctaagcagtacacaaatatagtccaaatgtcttctacaaag
aaagtcgctttttataccttaggttgtaaacttaatttttctgaaaccagcaccatcgcg
cgcagttttggcaaggaaggttttgataaggtagacttttctgaagccgcagatgtttat
gtgataaacacctgtagtgttacagaaaacgcagacaagcgttttaaaaacattgtaaag
caagctcaaaaagcaaatccagatgctgtaaaagtagctgtagggtgctatgcacaactc
aaacctgaagaacttgctgcggtagacggagtagatcttgtactaggagctacagagaag
tttaatgtaacaagctacataaacgacttgcttaacaatccagaccgtgcccgtgatgga
ggagaggtacacgcctgtgagatacaagatgcagacttttatgtaagctcttactctata
ggtgatcgtacacgtgctttcttaaaagtgcaagatggttgcgattataaatgtacctat
tgtaccataccactagcacgaggtatctctagaagtgatactttacagaatgtactggac
aatgcggctaaaatcgctgcacaagatatcaaggagattgtactcacaggtgttaatata
ggtgattacggtaaaggagaatttggtaacaaaaaacacgagcacacttttctagaactc
gtacaagagcttgatagggtagacggtatagagcgactgcgcatctcatctatagagcct
aatcttcttaaaaatgaaaccatcgaggtcgtgtcaaattcacgcacctttgtacctcac
ttccatatacccctacaaagcgggagtaataaaatattaggtttaatgcgacgtcgctac
cagcgagaactgtacgtagatcgcgttgcaaaaattaaagaagtgatgcctcacgcctgt
ataggtgtagatgtgattgtaggttttccgggagagacagatgaagattttcttgagacc
tataactttcttaacagcctagatatatcatacttacacgtattcacgtattctgaaaga
gataatacgccagcagccacaatggatggtgtggtgccaaaaaacgtgcgtagcaaacgc
agtaagatgttgcgtggcctttcggcaaaaatgagacgagccttttatgaatcacagcta
gataccaagcgtacggtactttttgaaagtgaaaataaagagggatatatacacggcttt
acagaaaactatgtaaaagtaaaggctccttggaacccagaacttgtaaaccagttacac
gaggtacaacttaccagtatagatgatgatggtatggtgcgttttgactttgtgggtgta
gaggcgtag
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