Dokdonia sp. MED134: MED134_14266
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Entry
MED134_14266 CDS
T03275
Symbol
phr5
Name
(GenBank) deoxyribodipyrimidine photo-lyase, class I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
dok
Dokdonia sp. MED134
Brite
KEGG Orthology (KO) [BR:
dok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dok03400
]
MED134_14266 (phr5)
Enzymes [BR:
dok01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
MED134_14266 (phr5)
DNA repair and recombination proteins [BR:
dok03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
MED134_14266 (phr5)
Prokaryotic type
MED134_14266 (phr5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
EAQ37912
LinkDB
All DBs
Position
complement(3175156..3176466)
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AA seq
436 aa
AA seq
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MSTKKVTIFWFRRDLRLDDNVGFLEALKGDYPVLPIFIFDKEILDKLPEDDARVTFIYNE
LQKMRDTLQAEHDSSLAMFYSTPEQIFKELIADYDVQAVITNRDYEPYALERDKKIASLL
EENDISFTTFKDQVIFEKDEIVKGDGDPYVVYTPFKNKWKATFDEDKDLIIHYTSQYLDN
LIDHSRLPNVTLVDMGFKKSSIEVPDYDVTPTLIENYEDTRNFPAQDGTSRLGPHLRFGT
VSVRKMVKKAIAQTNEVFWSELIWREFFMQILYHFPHTKDKAFRSKYDRIDWRNNEEEFE
KWKNGQTGYALVDAGMRELNATGYMHNRVRMLTASFLCKHLLIDWRWGETYFAEKLLDYD
MSSNVGNWQWAAGSGVDAAPYFRIFNPMTQVDKFDKQKEYINKWVPELQELSYPDKMVDH
KEARERCLKTYKEAVA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaaaaaaagtaacaatattttggtttcgtcgtgatttacgactggatgataat
gtaggttttctagaagcactaaagggagactacccggtcttacctatttttatctttgat
aaagaaattcttgataaactcccagaagacgacgcccgcgttacttttatttataatgaa
ttacaaaaaatgcgtgacacactgcaagcagagcacgacagctcgctggcaatgttttac
agcactccagaacaaatttttaaagagctcatagcggattatgatgtgcaggcagtgatc
acaaatagagattatgagccgtatgccttagagcgtgataaaaagattgcatcactacta
gaagaaaatgatatctcatttaccacctttaaagatcaagtgatttttgaaaaggatgag
attgtaaaaggagatggcgatccttatgtggtctacacaccttttaaaaataagtggaaa
gcgacttttgatgaagataaagacctcatcatacattacacctcgcagtatcttgacaat
cttatagaccatagtagactgcctaatgtcacgctggtagatatgggttttaaaaaatct
agcattgaggtgccagattatgacgtaacccctacccttatagaaaactatgaggacacc
cgcaattttcccgcacaagatgggacatcgcgattggggccgcacttacgttttggtaca
gtttccgtacgtaaaatggtaaaaaaagcaatcgctcagactaacgaggttttctggagc
gaactcatatggcgtgagttttttatgcaaattttatatcacttcccgcatactaaagac
aaagcctttagatcaaaatatgaccgtatagactggcgtaataatgaagaagagtttgaa
aaatggaaaaacggccagacgggctatgccctagtagatgctggtatgcgcgagctcaat
gcaacgggttatatgcacaaccgtgtgcgtatgctcacagcgagctttttatgcaagcac
ctacttatagactggcgctggggagaaacctactttgccgaaaagctactcgattatgat
atgagctcaaacgtgggtaactggcagtgggcagcaggctctggagtagacgctgcacct
tactttagaatttttaacccgatgacacaggttgataaatttgacaagcaaaaggaatat
atcaataaatgggtgccagagcttcaagagctttcgtatccagataaaatggtagatcac
aaagaggcaagagagcgctgtcttaagacatacaaagaagcggttgcttag
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