Desulfosudis oleivorans: Dole_1676
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Entry
Dole_1676 CDS
T00610
Name
(GenBank) Polyketide-type polyunsaturated fatty acid synthase, PfaA
Organism
dol
Desulfosudis oleivorans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Ketoacyl-synt_C
KR
Acyl_transf_1
PP-binding
adh_short_C2
PS-DH
adh_short
KAsynt_C_assoc
Thiolase_N
PKS_DH_N
3Beta_HSD
Motif
Other DBs
NCBI-ProteinID:
ABW67480
UniProt:
A9A0I0
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Position
1994060..2000629
Genome browser
AA seq
2189 aa
AA seq
DB search
MKKEGGIDNQAVAVVGMGSLFPLSASVKEYWRLISRGEDAITDVPSTHWSAEDYFRQDSK
GGDFTYCKRGGFLSAIDYDPTEFGIPPTILEATDTAQLLSLVVTKMALEDAGYGDTGRAW
NRERTGVVLGATGTQELVVPLASRLGFPFWKRALEDAGVPAEVADDVMARISDAYVAWQE
NSFPGLLGNVIAGRIANRFNLGGTNCVVDAACASSLSAVNLAVLELLSGKSDMMLTGGVD
ALNDIFMHMCFAKTSVLSFSGDAKPFSKDADGTVLGEGIGIVVLKRLADAEADGDRIYAV
IRAMGTSSDGRSAGIYAPVAEGQLRALRRAYNDAGFSPETVALIEAHGTGTRVGDAVEFE
ALKTFFNESGVEGKDRCAIGSVKSMIGHTKAAAGAASLIKASLALYHKAIPPTLKVTEPD
PKINIDQTPFYISTSLRPWLSTKKHPRRAGLSSFGFGGSNFHVVMEEYKAEKETPAWDGS
VEIAAFSGDSAADVQAGLKTFTEGVEAHAAKAGGRFAGVRVTAFKTRETFSHAHACRLLM
VIERTDDVADLLQKAMAAVTGGDAAAADGKKIFYDTEAGHAGKVAFIFPGQGSQYPYMAR
DLAVAFPEAHAVFETADIQFANLGAAPDIRLSDRVFPPGLFEKDKKSTEEALRNTDFAQP
AIGAASLATNKVLARFGLCPDMTCGHSFGELSALCCAGWMDEETFLSLAAARGKYMAAAG
KEKGAMLAIKADLARIEQFIADNGLDLVLANRNSYEQGVLSGREAEIDRAAELCKKDKLR
ATRLTVAAAFHTELVQDAAKPFKDYLRKKDITCSDIKVFSNVTAQPYPRDPAETRKILGN
QLLNPVNFVEEVENMYADGARTFLEVGPKSVLTGLVKSILKGKHFDALATDGSGGRNFGQ
TDLARVICFFAAQGRPVRLTEWEIPPVQARQQKMSLSICGANYRKEKPARPKRAPMVQKT
EPVPVAASGLQTAPASAAPPPGPDTDLVKNALAVVSESLRSMQALQQQTADAHQKFLETQ
TEAGKALGIVLEKTRSLGQTVMGEDGVVPAVPIKRSAPSAPAVRPEATPPSEPKAAIPAA
APKTPAGQSVDIAAIEAAMLDIVSRVTGYPVEMLGLEMDIENDLGIDSIKRVEILSVFEE
EHPDIPSATPEDLAEMRTLKEICDHLVSLSGAVAGTPSAAPASAAARASSADIEAAMLDI
VSRVTGYPVEMLGLEMDIENDLGIDSIKRVEILSVFEEEHPDIPSATPEDLAEMRTLKEI
CDHLVSLFGAMAGTPSAAPASAAARASSADIEAAMLDIVSRVTGYPVEMLGLEMDIENDL
GIDSIKRVEILSVFEEEHPDIPSATPEDLAEMRTLKEICDHLMKLGGIQTTPAGDKPAPA
VTAEPPEDTADSSGPVLRRVIQMESLPPDSQPPLALAKGKTLFVCTTDASWGRAVVEALM
AMDVNAALLENVSPEQDVSNAGGLLILGGLDPAEKQLWHPEDERFVKDAFALAGRVGPVL
IDGVKKNQVGIFAAVTFLDGQLGFGRTRAFNPMQAALAGLVKTAAIEWPGVTCRVIDLDP
EWTDVKAAAHAVAMEILSAEDPVEVGLSVEGKKGVALAAAPCEPEDLPLKSGDVVVVSGG
ARGVTAQCALALAKKVRPVLVLLGRSPLPGPEPAWLAGVTSEPEIKKQILENEFSGKTAT
PAEVDRVFKKHMAGREIAANMEALRAVCTEVVYRSTDVRDDAAVEDLFKAVSEKFGPVRC
IVHGAGVLEDRFIIDKTADQFDRVFDTKVAGAKALVLAADMKALRCLVFFSSVSARMGNK
GQADYAMANEVLNKTAQLMALQNQGCRVISFNWGPWDGGMVTASLKREFEKSRVALIPLA
AGARCMVEEMASPAGDVEVVIGAGFDDVGKATPETSPAPAPAKKEVENTGPLFEAFTRKV
DVEEFPVLKSHLLDGRPVVPFALAAEWVGSGALHANPGLMLIGIDDMRVLSGIKVDETGR
TVTVLAGKPIKSGTAFEVAVQIKSDSSGKETVHYGARAVLAAAYETPPVFTEPASLASSG
YTRTAAELYDTVLFHGKALHGLQEVVACSTEGIKATISSAPSPKQWIRRPVRNTWLADPL
ALDTAFQMAIVWCHEQAGMVCLPVSFKSFRQYRTAFPAEGVTAVLAVTNRTSRKMRGDVF
FLDENGAMVACMTGFEAVMDKSLGAAFKS
NT seq
6570 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaagagggcggcatcgacaaccaggcagtggccgttgtgggcatgggaagcctg
ttccccctgtccgccagcgtaaaggaatactggcgcctgatctcccgtggtgaggacgcg
attacggatgtaccttccacccactggtcggcggaagattattttcgccaggattccaaa
ggcggcgattttacttactgcaaacggggcgggtttctctccgccattgattatgatccc
actgaattcggcattccccccaccatcctggaagccacggatacggcccagctgctttcc
ctggtggtcacgaagatggctttggaggatgccgggtacggcgacaccggccgggcctgg
aaccgggagcgcaccggcgtggtgctgggcgccaccggcacccaggagctggtggttccc
ctggcctcgcgcctggggtttcccttctggaaaagggcgctggaggatgccggtgtaccg
gcggaggtggccgacgacgtgatggcccgcatctccgacgcctatgtggcctggcaggag
aactcctttcccggcctgctgggaaacgtgatcgccggccgcatcgccaaccggttcaac
ctgggcggtaccaactgcgtggtggacgcagcctgcgccagttccctgtcggctgtcaac
ctggcggttcttgaactcttgtccggaaaaagcgacatgatgctcaccggcggagtggac
gcgctcaatgatattttcatgcacatgtgctttgccaagacctctgtactctcctttagc
ggagacgccaagcctttttcaaaggatgccgacggcacggttttgggcgaaggcatcggc
atcgtggtactcaagcgcctggctgatgccgaggccgacggagacagaatctatgccgtg
atccgggccatgggcacctccagcgacggccggtcggccggcatctacgcgcccgtggcc
gaaggtcagctacgggccctgcggcgggcctataacgatgccgggttttcgccggaaacg
gtggcgctgatcgaggcccacggcaccggcacccgggtgggagacgccgtggagtttgag
gccctgaagaccttcttcaatgagtcgggcgttgaaggcaaagaccggtgcgccatcggt
tcggtaaagtccatgatcggccacaccaaggcagcggccggcgccgccagcctgatcaag
gcatccctggccctttaccacaaggcgattccccccaccctcaaggtgaccgagcctgat
cccaaaatcaatatcgaccagacccctttttacatcagcaccagcttgcggccctggctt
tccacaaaaaaacacccccgccgggccggcttgagctcatttggtttcgggggcagtaac
tttcatgtggtgatggaagagtacaaagcggaaaaagagacgcctgcctgggacggttca
gtggagatcgcggccttttccggggactcggccgcggatgttcaggccgggctgaagacc
ttcacagagggcgtggaggcccatgcggcaaaggcgggcgggcggtttgccggtgtgcgg
gtcaccgcctttaaaacaagggaaaccttttctcatgcccatgcctgccgcctgctgatg
gttattgaaagaaccgatgacgtggctgaccttctgcaaaaggccatggccgccgtcacc
ggcggcgatgccgcggcggcggatggcaaaaagattttttacgacaccgaagccggtcat
gccggcaaggtcgcttttatttttccgggccagggcagccagtatccttacatggcaaga
gacctggccgtggcctttcccgaggcccacgcggtgtttgaaaccgcggacattcagttt
gccaacctgggggccgccccggacattcggctttcggaccgcgtttttccgccgggtctg
tttgagaaggataaaaagagcacggaagaggcgttgcgaaacaccgatttcgcccagccg
gccattggtgcggccagcctggccacaaacaaggtgcttgcccggttcggcttgtgtccg
gacatgacctgcggccacagcttcggagaactgtccgccctgtgctgcgccggatggatg
gatgaggagacgtttctctccctggccgcggcccggggaaaatacatggccgccgccgga
aaagaaaaaggcgccatgctggccatcaaggccgacctggccagaattgaacagtttatc
gccgacaacggtctggacctggtcctggccaaccggaacagctatgagcagggtgtgctg
tcgggccgtgaggcggagatcgaccgggccgctgagttgtgcaagaaagacaaactcagg
gccaccaggctgaccgtggctgcggcctttcataccgagttggttcaggacgccgccaaa
cctttcaaagactacctgaggaaaaaagatataacttgttctgatataaaggttttttca
aacgtcaccgcccagccgtatcctcgtgatcccgcagaaaccagaaagattctgggcaat
caactgctcaacccggtcaatttcgtggaagaggtcgagaacatgtatgccgatggtgcc
cggacctttctggaggtcggccccaagtcggtgctcaccgggctggtcaagtcaattcta
aaaggaaaacattttgacgccctggccacggacgggtccggaggccggaatttcggccag
accgatctggcacgggtaatctgctttttcgcggcccagggtcggcccgtgcggctgacc
gaatgggaaataccgcctgtccaggcccgccagcagaagatgtcgctttccatctgcggt
gccaactatcgcaaggaaaaaccggcccgccccaaacgggcccccatggttcagaaaaca
gagccggttcctgtagcggcttccggcctccagacagccccggcatcagccgcgccaccc
ccggggcctgacaccgacctggtgaaaaacgcgcttgccgtggtgtcggaaagcctgcgc
tccatgcaggcccttcagcagcagaccgccgatgcccaccagaaatttctggagacccag
accgaggcgggaaaggcccttggcattgtactggagaagacccgtagcctgggtcagacc
gtgatgggcgaagatggtgtggttccggccgttcccattaaaaggtcagcaccatcggcc
cctgctgtaagacctgaggccacgcctccttccgaaccgaaggccgccatcccggccgcg
gcccccaaaacccctgccgggcagtcggtggatattgccgcaatcgaggcggccatgctg
gacattgtgagccgggttaccggctatccggtggagatgctgggcctggaaatggacatt
gaaaacgacctgggcattgactccatcaagcgggtggaaatcctgtcggtgtttgaagaa
gagcacccggacattccatcggccacccctgaagacctggccgagatgcgcaccttaaag
gagatctgtgatcacctggtatctctttccggtgccgtggcaggaacgccatcggctgct
ccggcttcggctgccgcccgggcctcatcagcggatatcgaggcggccatgctggacatt
gtgagccgggttaccggctacccggtggagatgctgggcctggaaatggacattgaaaac
gacctgggcattgactccatcaagcgggtggaaatcctgtcggtgtttgaagaagagcac
ccggacattccatcggctacgccagaagacctggctgagatgcgcaccttaaaggagatc
tgtgatcacctggtatctcttttcggtgccatggcaggaacgccatcggcggctccggct
tcggctgccgcccgggcctcatcagcggatatcgaggcggccatgctggacattgtgagc
cgggttaccggctacccggtggagatgctgggccttgaaatggacattgaaaacgatctg
ggcattgactccatcaagcgggtggaaatcctgtcggtgtttgaagaagagcatccggac
attccatcggccacccctgaagatctggccgagatgcggacgctaaaggaaatctgcgac
cacctgatgaaactgggcgggattcagacgaccccggccggggataagccagccccggcc
gttacagcggaaccccctgaggataccgccgattcatccgggccggtgttgcgccgggtc
attcaaatggagagcctgccgccggacagccagccgcccctggcgctggcaaaaggcaaa
accctgtttgtctgcacaaccgacgcatcatggggcagggcggtggtcgaggcgttgatg
gccatggatgtcaatgccgcgctcctggaaaacgtttcccctgagcaggatgtttcaaat
gccggcggcctgttgatcctgggcggccttgaccccgcggaaaagcagttatggcacccg
gaagatgagcggtttgtcaaggacgcctttgccctggccggccgcgtggggccggtgctg
atcgacggtgtcaaaaagaaccaggtcggtatttttgccgccgtcacctttctggacggc
cagttgggtttcggcaggacccgcgcgtttaatcccatgcaggcggccctggccgggctg
gtgaaaaccgcggccattgaatggccgggcgtgacctgccgggtgatcgaccttgatccc
gaatggaccgacgtaaaggcggcggcccatgccgtggcaatggagattttaagcgctgaa
gacccggttgaagtggggctttcagtggaaggcaaaaaaggtgttgccctggctgcggct
ccctgcgaacccgaggacctgccgcttaagtccggcgacgtggtggtggtatccggcggt
gcccggggtgttaccgcccagtgtgccctggccctggcaaaaaaggttcggcccgtgttg
gtgttgctgggccggtccccgctgcccgggcctgagccggcctggctggccggtgtgacc
agcgagccggagatcaagaagcaaatcctggaaaatgaattttccggcaaaaccgccacc
ccggctgaagtggaccgggtttttaaaaagcacatggccggtcgggagatcgcggcaaac
atggaagcccttcgggccgtatgtaccgaggtggtgtatcgctccaccgatgtgcgcgat
gatgcggccgtggaagacctgttcaaagcggtcagcgaaaaattcgggccggtgcgctgt
attgtccacggcgccggggtactggaagaccggtttatcattgacaagaccgccgaccag
ttcgaccgggtgtttgataccaaggtggccggggcaaaggccctggttttggcggcggac
atgaaggcgctgcggtgcctggtctttttttcttcggtgagcgcccgtatgggcaacaag
ggccaggccgactacgccatggccaatgaggtactcaacaaaacagcccagttgatggcc
ctgcaaaaccagggatgccgggtaatctcctttaactggggaccgtgggacgggggcatg
gtgaccgcctcgttgaaacgggagtttgaaaagagccgtgtagccctgattcccctggcc
gccggggcccggtgcatggtggaggagatggcttcgcctgccggtgacgttgaggtggtg
atcggcgccgggtttgatgatgtcggcaaggccaccccggaaaccagccccgctccggca
cccgcaaaaaaagaggtcgagaacacgggcccgctttttgaggcctttacccgcaaagtg
gatgtggaggagttcccggtattaaagtcccacctgctggacggcaggccggtggtgccc
tttgccctggccgccgagtgggtgggcagcggcgccctgcacgccaaccccggcctgatg
ctgatcggcatcgacgacatgcgggtgctgtccggcatcaaggttgatgaaaccggccgc
accgttacagtgctggctggaaagccgatcaaaagcgggaccgcctttgaagtggcggtg
cagataaaaagcgacagcagcggaaaggagacggtgcactacggggcacgggccgttctt
gccgccgcctatgaaacgccccctgtgtttacggaacccgcctcgcttgcctcttccggt
tatacccgcaccgcagccgagctctacgatacggtcctgtttcacggcaaggcccttcac
gggcttcaggaagtggtggcctgttcaacggagggaatcaaggcaaccatcagcagcgcg
ccttctcccaagcagtggattcgccggccggtccgcaacacctggctggccgaccccctg
gccctggacacggcctttcagatggccattgtgtggtgccacgaacaggcgggcatggtc
tgcctgccggtctcttttaaatcctttcggcaataccgcaccgcgtttcccgccgagggc
gtaaccgccgtcctggccgtcaccaaccggaccagccgcaagatgcgcggggatgtcttt
ttcctggatgagaacggcgccatggtggcctgcatgaccgggtttgaagcggtaatggac
aagtcgctgggcgcggcctttaaatcataa
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