Desulfosudis oleivorans: Dole_2115
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Entry
Dole_2115 CDS
T00610
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dol
Desulfosudis oleivorans
Pathway
dol03420
Nucleotide excision repair
dol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dole_2115
03430 Mismatch repair
Dole_2115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dol03400
]
Dole_2115
Enzymes [BR:
dol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dole_2115
DNA repair and recombination proteins [BR:
dol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dole_2115
MMR (mismatch excision repair)
Other MMR factors
Dole_2115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ABW67919
UniProt:
A8ZTY6
LinkDB
All DBs
Position
complement(2568459..2570309)
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AA seq
616 aa
AA seq
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MKMKLSPQQEAAVLHMGSPALVTAGAGSGKTRTLTAKIAHLISLGYPPERILAITFTNKA
ADEMKRRLVALTGIPETGFPWVRTYHSACYKILCVHCGLLGYTTPLQIYDTYHQRKTITD
VLIRMNHDKKFVPTILNHISKAKNSGNPGAYLDAYPFISYVRLADAYELYERMLKEKNAV
DFDNILLCVRDILRDHDDVRRRYQERFEFILVDEYQDTNNLQEDLTGLLCRGDNLFCVGD
DWQAIYSFRGSNMRHFLSFEQRYADARVFKLEQNYRSADTIVRVANDIIDYNHDKMDKTC
FSEESGGTVEIYEFDDEVEEARWVARKAEELNEDGVPYDAMAVLYRTKFTSLYFEHAFRR
AGIPYHLLGDRGFYDRKEVMDINSYLMAAVFEKDDTAFERIINIPRRGVGAKTLASINDM
RTGAMSLQAAVHLALAERRLSDKVYQALSDLMALLDDIRDMRPDAAIREVIERIGYLNYL
KQYADAGSMDFTEKVENIDQLISAAARMESLTAYLEEAALIREDKDDEEGGFGVNLATIH
AAKGLEFHTVFVVGCEENLLPHWKSLEEEDDLQEERRLMYVAATRAARCLFLTAAGFRKG
QFNRRSRFLFEIERSL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaagttatcccctcaacaggaagcagccgttctccacatgggctccccggca
ctggtgaccgccggcgccgggtcgggcaagacccggacccttaccgccaagatcgcccac
cttatttctctgggttaccctccggagcggatcctggccatcacttttaccaacaaggcc
gccgatgagatgaagcgccgcctggtggcattgaccggcatcccggagaccgggtttccc
tgggtgcggacctatcacagcgcctgctataaaattctctgcgttcactgcggcctgctg
ggctataccacgccccttcagatttacgatacctatcaccagcgcaaaaccatcaccgac
gtgctgatccgcatgaaccatgacaagaaatttgttcccaccattctcaaccatatctca
aaggccaagaactcgggcaatcccggggcctacctggacgcctatccctttatctcctat
gtgcgcctggccgacgcctatgaactgtacgaacggatgctaaaagagaaaaacgcggtg
gatttcgacaacatcctgctgtgcgtgcgggatattctgcgggatcacgacgatgtccgc
cgccgctaccaggagcggtttgaatttatcctggtggatgagtaccaggacaccaacaac
cttcaggaagaccttaccggcctgctctgccggggcgacaacctcttctgcgtgggcgac
gactggcaggccatctattcgtttcgcggcagcaacatgcgccattttctttcgtttgag
cagcggtacgccgatgcccgggtgttcaagctggagcagaactaccggtccgccgacacc
attgtccgggtggccaatgatatcatcgactacaaccacgacaagatggacaagacctgc
ttttccgaggagtctggcggcactgttgagatttatgagtttgacgacgaggtggaggag
gcccggtgggtggcccgcaaggccgaagaactcaacgaggacggcgttccctacgacgcc
atggctgtgctctaccgtaccaagtttacctctctctattttgagcacgccttccgccgg
gccgggattccctatcacctgctgggcgaccgggggttttacgaccgcaaggaggtcatg
gacatcaacagctacctcatggccgcggtgtttgaaaaggacgacaccgcctttgagcgg
atcatcaacattccccgccggggcgtcggcgccaagacactggcgtccatcaacgacatg
cgcaccggcgccatgagccttcaggcggcggttcacctggccctggccgagcggcgcctg
tccgacaaggtgtaccaggccctttccgatctgatggccctgctggacgatattcgggac
atgcggccggatgcggccattcgcgaggtgatagagcgcatcggttatctgaactacttg
aagcagtacgcggacgccggttccatggattttaccgaaaaggtggaaaacatcgaccag
ttgatttccgcagccgcccgcatggagagcctgaccgcctacctggaggaggcggccctg
atccgggaggacaaggacgacgaggagggcggcttcggggtcaacctggccaccattcac
gcggccaagggactggagtttcacaccgtgtttgtggtggggtgcgaggagaacctgttg
ccccactggaagtccctggaggaggaagatgaccttcaggaggagcggcggctgatgtat
gtggccgccacccgggcggcccggtgcctgttcctgacggccgcgggttttcgaaaaggc
cagttcaaccgccgcagccggtttttgtttgaaatcgagcggtcactgtag
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