KEGG   Desulfosudis oleivorans: Dole_2239
Entry
Dole_2239         CDS       T00610                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
dol  Desulfosudis oleivorans
Brite
KEGG Orthology (KO) [BR:dol00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dol02048]
    Dole_2239
Enzymes [BR:dol01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Dole_2239
Prokaryotic defense system [BR:dol02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Dole_2239
SSDB
Motif
Pfam: SWI2_SNF2 T1RH-like_C HSDR_N T1R_D3-like ResIII DEAD
Other DBs
NCBI-ProteinID: ABW68043
UniProt: A8ZUV3
LinkDB
Position
2712243..2715383
AA seq 1046 aa
MTPAGYTEDALIEQPAIALFKELGWETVNAYHEFEQGGSTLGRETKGEVILALRLRSALL
RLNPDAPTEAIDQTIEDLTRDRSRMSPAAANREVYHLLKHGVRVPVPDPEGDGETVEVVR
IIDWENPGKNDFLLCSQFWVTGEMYTRRADLVGFVNGLPLLFIELKATHRRLETAFTGNL
NDYKDTIPQMFWPNGLVILSNGSQSRVGSITAGWEHFSEWKKIGSEDEAGKISLETMLRG
VCEPARLLDLVENFTLFQEAPGGLIKLTAKNHQYLGVNNALAALTDIRQREGKLGVFWHT
QGSGKSVSMIFFAQKVMRKQPGNWTFVIVTDRQELDGQIYKNFASAGVVTEGRAQAESSK
HLRQLLGEDHRYIFTLIHKFRAPEMISTRDDIIVITDEAHRSQYDTLALNMRTALPNAAF
LAFTGTPLIVGEEKTRQVFGDYISVYDFRQSVIDGATVPLYYENRIPELQLVNDNLNEEM
ARLLEEAELDEAQEKKLEREFSREYHLITRDDRLEAVAKDIVAHFTGRGFSGKGMVICID
KATAIRMYDKVKKHWAAKIATLEAEKDTAPIEALPETEDRLAWMKETDMAVVVSQGQNEI
AEMANKGLDIRPHRKRVVEEDLDTKFKKPDDPFRLVFVCAMWMTGFDVPSCSTLYLDKPM
RNHTLMQTIARANRVYPGKVSGLIVDYAGVFRNLEKALAIYGAGEGGDKPIEDKAALVAA
LRQVLEETGALCQEQGVGLAAIRSADGFARVGLLDDAVEALVVSEEIKRRYLDLANAVQR
LYKAVLPDPAAHAFVAEVTPVKVIADKIRVLAPPADISQVMQQVEELLDRSIATEGYVFR
EIVPPFGHEHQIDLSDIDFEKLAEKFKTGRKRTINEKLKGAVARKLMIMVRLNRTRMDYL
EKFQAMIDAYNAGSLNAEAFFEQLMAFAGSLNEEEKRGVSEQLNEEELVLFDLLTKPRIE
MSEADRNKVKVTARELLATLKTGKLVLDWRKRQQARAEVRVPIEKVLDKGLPRAYTPELF
EQKTAAVFQHVYEAYCGAGQSIYAAA
NT seq 3141 nt   +upstreamnt  +downstreamnt
atgacccctgccggatacaccgaagacgccctgatcgaacagccggccatcgccctgttt
aaagaactgggatgggaaacggtcaatgcctatcacgagtttgaacagggcgggagcacg
ctgggccgggagacaaaaggcgaggtcatccttgctctccggctgcggagtgccctgctg
cgccttaacccggacgcgccgaccgaggccattgaccagaccattgaagacctgacccgg
gaccgttcgcgcatgagcccggcggccgccaaccgggaggtctatcatctgcttaaacac
ggcgtgcgcgttcccgtgcccgaccccgaaggcgacggtgaaacggtagaagtggtgcga
atcatcgactgggagaacccgggcaaaaacgactttctgctctgctcgcagttctgggtg
accggcgagatgtatacccgccgggccgacctggtgggttttgtcaacggcctgcccttg
ctgtttatcgaacttaaagcaacacaccgccgcctggaaaccgcctttaccggcaacctg
aacgattataaagataccattcctcagatgttctggccgaatggcctggtcatactttcc
aacggcagccagagccgggtgggcagtatcaccgccggatgggaacacttttccgagtgg
aagaaaatcggcagcgaggatgaggcgggcaaaatctcgctggagaccatgctgcgcggc
gtgtgcgaaccggccaggctgctggacctggtagagaacttcaccctgtttcaggaagcg
cccggcgggctgatcaagctgacggccaagaatcatcagtaccttggggtcaacaacgcg
ctggccgccctgaccgacattcggcaacgggaaggcaaactgggcgtgttctggcatacc
cagggcagcggcaagagcgtttccatgatcttttttgcccagaaggtgatgcgcaagcag
ccgggcaactggacctttgtgattgtcaccgaccgccaggaactggacggacagatttac
aaaaatttcgcttcggccggggttgtcaccgaaggccgcgcccaggccgaaagcagcaag
cacctgcggcagttgctgggtgaggatcaccgctatatttttaccctgatccacaaattc
cgtgcgccggagatgatctccacccgcgacgacatcatcgtcatcactgacgaagcccac
cgcagccagtatgatactctggcgctgaacatgcgcacggctttgccgaacgcggctttt
ctggcctttaccggcacgccgctgatcgtaggcgaggagaagacgcggcaggtattcggt
gattacatcagtgtttatgatttccgtcagtcggtgattgacggcgccacagtgcccctc
tattacgaaaaccgcattcctgaactgcaactggtcaacgacaacctcaacgaggagatg
gcgcgcctgctggaagaggcggaactggatgaggcccaggagaaaaaactggaacgggaa
ttttcccgggagtaccacctgatcacccgcgatgaccggctggaggctgtggccaaggac
attgtcgcgcatttcaccggtcggggcttttccggcaagggtatggtgatctgcattgac
aaggccacggccatccgcatgtacgataaagtgaaaaaacactgggcggcaaagatcgcc
accctggaggcggaaaaggatacggcgccgattgaagccctgcctgaaaccgaagatcgc
cttgcctggatgaaagagaccgatatggcagtggtggtttcgcaggggcagaacgaaatc
gccgaaatggcgaacaaggggctggacatccgcccgcaccgcaagcgcgtggtcgaagaa
gacctggataccaagttcaaaaaaccggacgatccgttccggctggtatttgtctgcgcc
atgtggatgaccggctttgacgtgccaagctgttccaccctctatcttgacaagcccatg
cgcaatcacacgctgatgcagaccattgcccgagccaaccgggtctatcccggcaaggtc
agcggcctgatcgtggattatgccggggtgttccgaaaccttgaaaaggcgctggccatt
tatggcgccggcgagggcggcgacaagccgattgaagataaggccgcgctggtggcggcg
ctgcggcaggtattggaagaaaccggggccttgtgtcaggaacagggggtgggtcttgcg
gccattcgatctgctgatgggtttgcccgcgtgggcctgcttgatgatgccgtggaggcg
ctggttgtttcagaagagatcaagcgccgttatcttgacctggccaatgccgtgcagcgg
ctgtataaggctgtgctgcccgacccggccgcgcatgcgtttgtcgccgaggtgacgccc
gtcaaggtgattgcggataaaatccgcgttttggcaccgccggccgacatctcccaggtc
atgcaacaggtggaggaactgcttgaccgctccattgccactgagggttacgtctttcgc
gagattgttccgccttttggccacgagcaccagattgacttgagtgatattgactttgaa
aagctggctgagaaatttaagaccggccgcaagcgcaccatcaatgaaaagctcaaaggg
gctgtggcgaggaaactcatgatcatggtgcggctcaaccgcactcgcatggattatctg
gaaaagttccaggcgatgatcgacgcctacaacgccggcagcctcaatgccgaggcgttc
tttgaacaactgatggcttttgccgggagcctgaatgaagaagaaaaacgcggcgtaagt
gaacaattaaatgaggaagagctggtactgtttgaccttttaaccaaaccacggattgaa
atgagcgaggcggatcgcaacaaggtgaaagtcactgcccgggaactgctggccacactc
aaaactggcaaactggtgctggactggcgcaagcggcaacaggcgcgggctgaagtccga
gtccccattgaaaaggtgcttgataaggggctgccaagggcctacacaccggaactgttt
gagcaaaaaacagcggctgttttccagcatgtctatgaggcttactgtggtgcgggacaa
agtatttacgcggcggcataa

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