Desulfosudis oleivorans: Dole_2348
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Entry
Dole_2348 CDS
T00610
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dol
Desulfosudis oleivorans
Pathway
dol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Dole_2348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dol03400
]
Dole_2348
Enzymes [BR:
dol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Dole_2348
DNA repair and recombination proteins [BR:
dol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Dole_2348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
PIF1
SLFN-g3_helicase
Helicase_RecD
AAA_28
AAA_22
AAA_16
nSTAND3
UvrD-helicase
NPHP3_N
AAA
T2SSE
PhoH
NTPase_1
AAA_5
AAA_24
DEAD
TrwB_AAD_bind
Zeta_toxin
RsgA_GTPase
ABC_tran
Mg_chelatase
TsaE
Pirin
NB-ARC
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ABW68152
UniProt:
A8ZVG5
LinkDB
All DBs
Position
complement(2830942..2833110)
Genome browser
AA seq
722 aa
AA seq
DB search
METTLTGQLERITYTSEESGFTVARVRVRGQQDPVTVVGPLLGVSPGEVLEMQGQWTTHP
SFGDQFKVESYKARAPVTVEGIQKYLASGMIKGIGPVTAERITKKFGKKTLQVLETDISR
LAKVPGIGKKRITMIQASWEAHKEVRDVMVFLQSQGIGSGYAMRIFQTYGTGTMDVVTNN
PYRLAADVAGIGFLIADRIAEKLGFAKNSPVRVRAGVLHVLSSLGDDGHVYYPFEPLVRK
SMEILGVDRALVVAAVADEATEKNIVVEELKDDDGEDGKGVYLAGYFLCETGIARRIKEQ
VATGKVIREIDTARAVDWVQKKLSITLAEKQAEAVRTAAKSKLMVITGGPGTGKTTIVKS
VLHIINALGAVVLLAAPTGRAAKKLKEATGHEARTIHRLLEFSMAKGGFQRHDSRPLECD
LLVIDEASMIDTVLMYHLLKAVPPHAVLILVGDVNQLPSVGPGNVLNDIISSGVAPVVTL
NEIFRQARQSRIVVNAHLINQGQLPHIQNDDTAGDFFFVDQEDPDTVADTIVDLVTRRIP
AKFDLDPFDDIQVLTPMHKGTVGAINLNNRLQKALNPESKGIVRGEATFGLSDKVMQIRN
NYDKEVFNGDIGRIVRINQEARVLGVLFDGREVAYDFSELDELVLAYAISVHKSQGSEYP
AVVMPVLTQHYILLQRNLVYTAVTRGRRLVVMVGTKKALAISVNNNRPNLRYTRLRQRLA
GA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccacattgacaggccagctggagcgcatcacctacaccagcgaggagagcggg
tttaccgtggcccgggtcagggtgcggggccaacaagacccggttaccgtggtggggccg
ttgctgggggtgtcaccgggtgaggtccttgaaatgcagggccagtggaccacccacccc
tcctttggtgaccagttcaaggtggaatcttacaaagcccgggccccggtcacggtggag
ggcattcagaaataccttgcctcaggcatgatcaagggcatcggcccggtcacggccgag
cgcatcacaaaaaagttcggtaaaaagacccttcaggtcctggagaccgacatcagccgc
ctggccaaagtgccgggcatcggcaagaaacgcatcaccatgattcaggcgtcctgggag
gcccacaaagaagtccgggacgtgatggtctttttgcagagccagggcatcggctccggc
tacgccatgcgcatttttcagacgtatggcaccggcaccatggacgtggtgacgaacaac
ccctaccggctggccgctgacgtggccggcatcgggtttctcatcgccgaccgcatcgct
gaaaaactggggtttgccaaaaattcaccggtgcgggtgcgggcaggggtgctgcatgtg
ctttccagcctgggcgatgacggccatgtctattacccctttgagccgctggtccgaaag
agcatggagatcctgggcgtggaccgggcactggtggtggctgccgttgccgacgaggca
acggaaaaaaatatcgtggtcgaggagttgaaggatgacgacggcgaggacggcaagggg
gtttacctggccggctattttctgtgcgaaaccggcatcgcccgccggataaaagagcag
gtggccaccggcaaggtgattcgggagatcgacacggccagggccgtggactgggtgcag
aaaaagctttccatcaccctggccgagaagcaggccgaggcggtgcgcaccgcggccaaa
agcaagctcatggtgatcaccggcgggccgggtacgggcaagaccaccatcgtaaagtcc
gtgctgcacatcatcaacgccctgggggccgtggtgctgctggccgcgcccacgggccgg
gccgccaagaaactcaaggaggccaccggccacgaggcccgcaccattcaccgcctgctg
gagttttccatggccaagggcgggttccagcgccacgacagccggcccctggagtgcgat
cttttggtgatcgacgaggcctccatgatcgacacggtgctgatgtaccacctgctcaag
gcggtgccgccccatgccgtgctgatccttgtgggggacgtgaaccagttgccgtcggtg
gggccgggcaacgtgttaaacgatattatctcctcgggcgtggcgccggtggtgacgtta
aacgagattttccgccaggccaggcagagccggatcgtggtcaacgcccatctgatcaac
cagggacaactgccccatattcagaacgacgatacagccggcgactttttctttgtggac
caggaagacccggacacggttgccgacaccattgtcgacctggtcacccgccgcattccg
gcaaagtttgaccttgatccctttgacgacattcaggtgctgacccccatgcacaaggga
acggtgggcgccatcaacctgaataaccggctgcagaaggcgttaaacccggagtcaaag
ggcattgtccggggcgaggccaccttcggcctgtcggacaaggtgatgcagattcgcaac
aactatgacaaggaagtgttcaacggcgacatcggccgcattgtccgtatcaatcaggag
gcccgggtgctgggcgttctgtttgacgggcgggaggtggcttacgatttttcagagtta
gacgagctggtgctggcctatgccatttccgtgcacaagtcccagggatcggagtatccg
gcggtggtgatgcctgttctgacccagcactacatcctgttgcagcgcaacctggtgtac
acggccgtgacccggggccgccgcctggtggtgatggtgggcaccaaaaaggccctggcc
atcagcgtgaacaacaaccggcccaacctgcgctacacgcggctgcgccagcggctggcc
ggtgcataa
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