Desulfosudis oleivorans: Dole_2355
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Entry
Dole_2355 CDS
T00610
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
dol
Desulfosudis oleivorans
Brite
KEGG Orthology (KO) [BR:
dol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dol03016
]
Dole_2355
Enzymes [BR:
dol01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Dole_2355
Transfer RNA biogenesis [BR:
dol03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Dole_2355
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ABW68159
UniProt:
A8ZVH2
LinkDB
All DBs
Position
complement(2839488..2840888)
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AA seq
466 aa
AA seq
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MKRFYIHTIGCQMNVYDSSQLSAILTAMGHRSVNAPEQADLVFVNTCTIRAKAKQKATSF
VGRLAAMKRARPDMIVGVGGCLAQEEGRQLLDAFPCVDIVFGTHALGRLPGHIQAVAHQG
DRIVDVEMTAAIDESVHALQGPDSSGVTGFITIMRGCDNFCTYCVVPYVRGRETSRAPEH
ILDEIRARVAGGLREITLLGQNVNSYGQKEGLCSFADLLARVNEIDGLHRIRFTTSHPKD
LSPELAAAFTSLDKLCSHVHLPAQSGSDAVLKRMNRRYTRQAYLEKLHWLREAQPGMALS
TDIIVGFPGETEQDFLQTLDLIEKVRYDSIFAFMYSDRPLAPARAFDGKVDEAEKQQRIY
ALLELQNRITAEKNRALEGRVEQVLVEGKSKSSGRNDITADTVQWTGRTTCNRVANFTVP
RELASGNAVGPGAMVRVEIMSGLAHSLSGIAVGVEKPGAGGDAHAA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggttttacatccataccatcggctgccagatgaacgtgtacgattcatcccag
ctgtcggccatccttaccgccatgggccaccgatccgtaaacgcacctgaacaggccgac
ctggtctttgtcaacacctgcaccattcgggccaaggccaaacagaaggccaccagcttt
gtgggccggctggccgccatgaagcgggcccggccggacatgatcgtcggcgtgggtgga
tgcctggcccaggaggagggccggcagttacttgacgctttcccctgcgtggatatcgtg
ttcggcacccatgccctgggccggctgcccggacatattcaggccgtggcgcaccagggc
gaccgcatcgtggacgtggagatgaccgccgccatcgacgaatcggtgcatgcccttcag
gggccggacagcagcggggtaaccggttttatcaccatcatgcgggggtgcgacaacttc
tgcacctactgtgtggttccctatgtgaggggccgggagaccagccgcgcgccggagcat
attcttgatgagattcgggcccgtgtggccggcgggctgcgggagatcaccctgctgggc
cagaacgtgaacagctatggccaaaaagaggggctctgctcttttgccgaccttctggcc
agggtcaacgagattgacgggctgcaccgcattcggtttaccacctcccatcccaaggac
ctttcaccggaactggcagcggcctttacctcccttgacaaactgtgcagtcacgtgcac
ctgccggcccagtccggttccgatgctgttttaaagcgcatgaaccgacgctacacccgg
caggcctatctggaaaaacttcactggctgagggaggcccaacccggcatggccctttcc
accgatatcattgtggggtttcccggggagacggagcaggattttttacagaccctggac
ctgatcgaaaaggtccggtacgacagcatctttgccttcatgtattcagaccggcccctg
gcaccggcccgtgcgtttgacggcaaggtggatgaagcggaaaagcagcagcgcatttac
gccctgctggaactgcagaaccggatcaccgctgaaaaaaacagggcgctggagggccgt
gtcgaacaggtgctggtggagggcaaaagcaagtcctcgggcagaaacgacatcacggcg
gataccgtccagtggaccggccgcaccacctgcaaccgggtggccaatttcacggtgccc
cgggagcttgccagcggcaatgccgttggaccgggcgccatggtgcgcgtggagatcatg
tccggcctggcccacagcctgtccggcattgccgtaggtgttgagaaaccgggagcagga
ggagacgcgcatgctgcataa
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