Desulfosudis oleivorans: Dole_2376
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Entry
Dole_2376 CDS
T00610
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
dol
Desulfosudis oleivorans
Pathway
dol03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dole_2376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dol03400
]
Dole_2376
DNA repair and recombination proteins [BR:
dol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dole_2376
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dole_2376
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
SWI2_SNF2
AAA_22
AAA_16
DUF87
Kinesin
AAA
Microtub_bd
AAA_7
UB2H
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
ABW68180
UniProt:
A8ZVJ3
LinkDB
All DBs
Position
complement(2861743..2863743)
Genome browser
AA seq
666 aa
AA seq
DB search
MYDLTTSFTPAGDQPRAIRRLCDQIRSGRRHNVFVGVTGSGKTFTMAHVIAELKRPALII
APNKTLAAQLYNEFHALFPRNAVEYFVSYYDFYQPEAYLPVTDTYIQKDSSINDTIDKMR
HSATRSVLSRPDVIVVASVSCIFGLGSPEDYRGLRVELAPGMELDRDRLLADLVAIQYER
NDYDFSRGVFRVRGDRVDIFPASEEEAALRVEFFGDEVEALFEIDPLKGSVRGKIPRAVI
YPATHYVTRQQDRKAIVDRVNEELKVRIDHFRAAGKLIEAQRIEERTRFDLEMILEMGYC
NGIENYSRHLTGREPGQPPATLLDYFPDDFLLFLDECHITVPQLGAMYKGDHSRKSTLVE
FGFRLPSALDNRPLTFEEFEEKTGRAAVIYVSATPAAYEYRKAGDAVAEQIVRPTGLVDP
RIEVRSAENQVDHLFDEIRARVEKNERVLITTLTKRMAEDLTDYYAELGVKTRYLHSEVK
TLERMAVISELRRGDVDVLIGINLLREGLDIPEVSLVAVLDADKEGFLRSERSLIQIFGR
AARNVNGTVILYADRITDAMARAMDETNRRRKIQATYNTDHHITPRTIFKEMSPDFGAQG
GDRAGPSAAVAETLARYGDTDDLDEIIRRLEKEMKAAADDYEFEKAADIRDRIAALRKLI
VFDGNG
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatctgaccacttcattcaccccggccggggatcagccccgggccattcgcagg
ctctgcgaccagatccgttccggccgtcgccacaacgtgttcgtgggcgtcaccgggtcg
ggcaagacctttaccatggcccacgtgatcgccgagctgaaacggccggccctgatcatc
gcgcccaacaagacactggcggcccagctctacaatgaattccatgccctttttccgcgc
aacgcagtggaatattttgtcagctactacgatttttatcagccagaggcctacctgccg
gtgaccgacacctatattcagaaggattcgtcgatcaacgacaccattgacaagatgcgc
cactccgccacccggtcggtgctttcccggcctgacgtgatcgtggtggccagcgtgtcc
tgcatcttcggtctggggtccccggaagactaccggggcctgcgcgtggaactggcgccg
ggcatggaactggaccgggaccggctcctggccgacctggtggcgattcagtacgagcgc
aacgactacgatttttccaggggcgtgttccgggtgcggggcgaccgggtggacattttc
cccgcgtccgaggaggaggcggccctgcgggtggagtttttcggcgacgaggtggaggcc
ctgtttgaaattgacccgctcaagggcagcgtgcggggtaaaattccaagggccgtcatc
tacccggccacccactacgtaacccggcagcaggaccgcaaggccatcgtggaccgggta
aacgaggaactcaaggtccggatcgatcactttcgcgctgccggcaagctgatagaggcc
cagcgcatcgaggagcggacccggtttgacctggagatgatcctggagatgggatactgc
aacggcattgaaaactactcccgccacctgaccggccgggagccgggccagcccccggcc
accctgctggactatttccccgacgattttctgctgttcctggacgagtgccatatcacc
gtgccccagctgggggccatgtataagggggaccactcacgcaagtccacgctggtggag
ttcgggttccggctgccgtcggccttggacaaccggcccctgacctttgaggagtttgag
gaaaagacagggcgggccgcggtgatctatgtgtcggccacgccggctgcctatgagtac
cgcaaggcgggcgatgccgtggcggagcagatcgtgcggcccaccggcctggtggatccc
cggattgaggtgcgaagcgcggaaaaccaggtggatcacctgtttgacgagattcgggct
cgggtggagaaaaacgagcgggtcctgatcaccaccctgaccaagcgcatggccgaagac
ctgaccgactactacgccgagctgggggtcaagacccggtaccttcattccgaggtaaag
acgctggagcgcatggccgtgatctccgaactgcggcggggcgacgtggatgtgctgatc
ggcatcaacctgttgcgggaggggctggatatccccgaggtctccctggtggccgtgctg
gacgccgacaaggaggggtttctccggtccgaacgatccctgattcagattttcggccgg
gccgcccggaacgtcaacggcacggtgattctctacgcggaccgcatcaccgatgccatg
gcccgggccatggatgagaccaaccgtcggcggaagattcaggccacctataacacggac
caccacatcacgccccggacgattttcaaggagatgtccccggatttcggggcacagggc
ggtgacagggcagggccttccgcagccgtggccgaaacccttgcccggtacggtgacacg
gacgacctggacgagattatccggcgcctggaaaaggagatgaaggccgctgccgatgat
tatgaatttgaaaaggccgccgatatccgggaccggatcgcggcgttaaggaagctgatt
gtttttgacgggaatggatag
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