Desulfosudis oleivorans: Dole_2919
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Entry
Dole_2919 CDS
T00610
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dol
Desulfosudis oleivorans
Pathway
dol03420
Nucleotide excision repair
dol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dole_2919
03430 Mismatch repair
Dole_2919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dol03400
]
Dole_2919
Enzymes [BR:
dol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dole_2919
DNA repair and recombination proteins [BR:
dol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dole_2919
MMR (mismatch excision repair)
Other MMR factors
Dole_2919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABW68722
UniProt:
A8ZYJ7
LinkDB
All DBs
Position
complement(3505433..3507298)
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AA seq
621 aa
AA seq
DB search
MSDLNPEQQKASEFTDGVCVVIAVPGSGKTRTMMERIGILVNKHGIPPENILGLTFTRNA
ADEMRHRLVPVLGEMSSRVFLTTIHSFCYTLLRSEGIVFEILSGREQMIFIKEVIKKLKI
REVSAGMVLGEISLAKNNLIGCEEFRVMHAGDRTMVRIADIYEAYDREKSARMLMDFDDL
LVRTHDMLNNRIDIREKYQEVFCHLLVDEFQDTNPAQMEILKLLIPENRQGSFWCTGDDH
QAIFSFTGASVGNIIHFKSIFPDSQQMILHVNYRSTPQILAACQNLIRHNEKQIHKTLKT
DNPDGEEVIVLESSSEETEAINLVHEIQTLKESTDYDYQDMAVLYRCNFQSRIIEEVFSQ
HKIPYHIENGLCFYDRREVKILLDYLRVISSPETDEGDEALAGILNVPNRYIGRKFIGEL
RSFAAEKQFHLYRALKELPVTLPYIRKNIQALTGFLDPLISEAGHIRPAEAISLVRTSLD
IDRYVSEEDMPSPDDVKIQNMDQLLLSAARYDDIRAFLDYAAGFQNESVSDNREGVSLMT
IHKAKGLEFPVVFLVGMVEGILPTRRNENIEEERRICFVAISRAMHLLYLSHYMTCLGQA
ARTSRFLCEILGQETDKKVSA
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttaaatccggaacagcaaaaggcgtctgagtttaccgacggggtctgcgtg
gtcatagcagtgcccggcagtggtaaaacccggaccatgatggaaagaatcggcatcctg
gtcaataagcatggcatccccccggaaaacatcctgggcctcacctttacccggaacgcg
gcggatgagatgagacacagactggtcccggtgttaggagagatgtcatccagggtcttt
ttaaccaccatacattcgttctgttacacgttattgcggtcggaagggattgtctttgag
attctttccggcagggaacagatgattttcataaaggaggtcataaaaaagctcaaaatc
agagaggtgtccgccggcatggtgcttggagaaatctccctggcgaaaaacaacctgatc
ggttgcgaggagttccgggtcatgcatgcgggtgaccggaccatggtcaggatcgctgat
atctacgaagcctatgaccgtgaaaaatcggcacgtatgctcatggactttgatgatctg
ctggtgagaacccatgacatgctcaataaccgtatcgacatacgagaaaaatatcaggag
gtgttttgtcatctgctggtggatgagttccaggacaccaatcccgcccagatggaaatc
ttaaaactgttgataccggaaaaccggcagggctctttctggtgcacgggagacgaccat
caggcgatattttcctttaccggggcttcggtgggtaacatcattcatttcaaatccatc
tttccggattcacagcagatgatactgcatgtcaactaccggtcaactccccagatcctt
gcagcctgccagaacctgatccggcataacgaaaaacagatccataaaaccttaaaaacg
gacaatccggacggtgaggaggtcatcgttcttgagtcctcttctgaagagaccgaagcc
atcaacctggtccatgagatacagaccttaaaagaatctacggattatgattaccaggat
atggccgtgctctaccggtgcaattttcaaagccggatcatcgaagaggtgttctctcag
cacaaaatcccttatcacattgaaaacggcctctgcttttatgaccggcgggaggtaaag
attctgctggactatctgcgggttatatcctcccctgagacagacgaaggagatgaggcc
cttgccgggattttaaatgtccccaaccggtatatcggcagaaagttcatcggcgagctc
aggtcctttgccgcagaaaaacagtttcatctctaccgggccttaaaagaactgcctgtc
acccttccttatatccggaaaaacattcaggcgttaaccggatttttagatccgctgatc
agtgaggccggccatatcaggcctgctgaggcaataagcctggtcaggacctctctggat
attgaccgatatgtcagtgaagaggacatgcccagcccggatgacgtgaagattcagaat
atggaccagctgctgctgtccgcggcccggtatgatgatatcagggcctttctggactat
gcggcgggctttcagaacgaatcggtcagtgacaacagggagggggtcagcctgatgacc
attcataaggcaaaggggctggagtttcccgtggtgttcctggtcggtatggtggagggg
attctgcccacccggcgcaatgaaaacatcgaggaggaacggcgtatctgctttgtcgcc
atttcccgtgccatgcatcttttgtatttgagccattacatgacctgcctgggtcaggcg
gcccgcacatcccgattcctttgcgagatactgggccaggagaccgacaaaaaggtttct
gcctga
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