Desulfosudis oleivorans: Dole_3039
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Entry
Dole_3039 CDS
T00610
Name
(GenBank) phenylalanyl-tRNA synthetase, beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
dol
Desulfosudis oleivorans
Pathway
dol00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dol00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Dole_3039
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dol01007
]
Dole_3039
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dol03016
]
Dole_3039
Enzymes [BR:
dol01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Dole_3039
Amino acid related enzymes [BR:
dol01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Dole_3039
Transfer RNA biogenesis [BR:
dol03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Dole_3039
Prokaryotic type
Dole_3039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
HTH_50
TaqI_C
Motif
Other DBs
NCBI-ProteinID:
ABW68842
UniProt:
A8ZZ69
LinkDB
All DBs
Position
complement(3645244..3647655)
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AA seq
803 aa
AA seq
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MKVSLHWLQEYVPVTLSPADLAEALTMAGLEVEAVSDRYAGLDTVVTGKVTRVSSHPDAD
RLTVCQVETGDRPLTIVCGAPNVKEGMVAAVALPGTELPGGLAVRKSKIRGVASEGMLCS
AVELGIGEDGAGILSLDGATPVGIPATRALNLFDTVLEIDLTPNRADCLSMIGVAREVAA
LSGGRVARPVSSVPEAAGDVADYASIVIEEPDLCPRYTARVVLDVTVGPSPFWLQDRLRS
VGLKPINSVVDITNFVMMETGQPLHAFDLDRLSGNRIVVRRAGAGERFVTLDDKERVLSD
DMLMICDAEKPVAVAGVMGGLNSEIVPTTRRVLIESACFAAPSIRKTAKTLGLASDASHR
FERGVDPEGTEFAVDRAARLMAEVAGGKPARGVIDNHPRPAGEKRIALGIGDTNRRLGTS
LGAEDVARLLASVELLSEPEDNDRLTVTVPSFRVDIDRPEDLIEEVARLWGYNNIAVSFP
VIPVSGRLPSGALARRIRVKEAMVGFGFAEVVNYSFIGADACSSMRFAAGTAEDSPIPIL
NPLSQDQAVMRTSLVPGLLKNTRDNIFQQEKTIRLFETGKVFLPQPGQELPDEPEMLAGL
WSGARQPRTWLTMEERCDFYDIKGVLEALISALDLETSFSALAADQCRYTLAGRTARVMI
GETAVGLAGEVRPDVLESFGVRQPVFVFEINLSTLFPMITDERCARPISRFPSVSRDITL
IVASTVEAADLLKSLAMQGQSLIEQMYLMDVYEGDPIPSGKKSLSIRVVYRSFEKTLKDA
FVNRIHTETTEALVKAFNAELPG
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcagccttcactggttgcaggaatatgttcccgtaacactgagccccgcggac
cttgccgaggccctgaccatggccggcctggaagtggaggccgtgtccgaccggtatgcc
ggcctggacacggtggtcaccggaaaggtgacccgtgtctcttcccacccggacgcggac
cgtctcaccgtctgccaggtggagaccggggaccggcccctgaccatcgtgtgcggggcc
cccaatgtgaaggaaggcatggtggccgccgtggccctgccgggcaccgaacttcccggc
ggactggcggttcgaaaaagcaaaatacggggtgtggcttccgaaggcatgctgtgcagc
gccgtggagctcggtatcggtgaagacggcgccgggattctctctctggacggcgccacg
cctgtgggcattccggcgacccgggccctgaaccttttcgacacggtgctggagattgat
ctgacccccaaccgggccgactgtctcagcatgatcggcgtggcccgtgaagtggcggcc
ctgtccggcggccgagtcgcaagacctgtttcttcggtgccggaagccgccggcgacgtg
gccgattacgcgtcgattgttattgaagagccggacctctgtccccggtacacggcccgt
gtggtcctggatgtcacggtggggccttcccccttctggctgcaggaccgactgcgctcc
gtgggattaaagcccattaacagcgtggtggacatcaccaacttcgtgatgatggaaacc
ggccagccccttcacgcttttgacctggaccgcctttccggaaaccgcattgtcgtgcgc
cgggccggggccggggagcgttttgtcacgctggatgacaaggaacgagtcctttccgac
gacatgctcatgatctgtgacgccgaaaagccggtggccgtggccggtgtcatgggcggc
cttaattctgaaattgttcccaccacccggcgggtgctgattgaaagcgcctgctttgcc
gctccttccattcgcaaaaccgccaagaccctgggtctggccagtgacgcgtcccaccgc
tttgagcggggcgtggacccggagggaacggagtttgccgttgaccgggcggcccggctc
atggccgaggtggccggtggaaaaccggccaggggagtgattgacaaccatccgcggccg
gccggcgaaaaacggattgccctgggcatcggtgacaccaaccgccggctgggtacgtct
ctgggagccgaggatgtggcccggctgctggcatcggtggaacttctttcggaaccggag
gacaacgaccgcctcaccgttacggtgccgtcgtttcgtgtggatatcgaccggcccgaa
gacctcatagaagaggtggcccggctctggggatacaacaacattgccgtgagttttccc
gtgattccggtcagtggcaggctgccctcaggagcgctggcccggcggattcgcgtcaag
gaggcaatggtgggcttcggttttgccgaagtggtcaactacagttttatcggcgccgac
gcctgcagcagcatgcgttttgcggccggcaccgccgaagacagccccattccgattctc
aatcccctgtcccaggaccaggccgtgatgcggacctctctggtgcccgggcttttgaaa
aacacccgggacaacatttttcagcaggaaaagaccattcgcctgtttgaaaccggcaag
gtgtttctgccccaacccggtcaggagctgcccgacgagccggaaatgctggccggtctc
tggtccggagcccggcagccccgcacatggctcaccatggaagagcggtgcgacttctac
gacatcaagggggtgctggaagccctgatctccgcccttgacctggaaacctctttttcc
gccctggccgccgaccagtgccggtacacccttgccggccggaccgcccgggtgatgatc
ggtgaaacagcggtgggcctggccggggaggtgcggcccgatgtgctggagtcctttggc
gtcaggcagccggtttttgtttttgaaatcaatctttccacgctgtttcccatgatcacg
gacgaaaggtgtgcccggcccatttcccggttcccctccgtgtcccgggatattaccctg
atcgtggccagtaccgtggaggccgccgacctgttgaaaagccttgccatgcagggccag
tccctgatagaacagatgtatctgatggatgtttacgaaggggacccgatcccttcggga
aagaaaagcctctccatacgggttgtctaccggtcttttgaaaaaacgctgaaagacgcg
tttgtcaaccggattcacacggagacaaccgaggcgctggtcaaggcgtttaacgccgag
ctgcccggttaa
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