Desulfosudis oleivorans: Dole_3191
Help
Entry
Dole_3191 CDS
T00610
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
dol
Desulfosudis oleivorans
Brite
KEGG Orthology (KO) [BR:
dol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dol03016
]
Dole_3191
Enzymes [BR:
dol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Dole_3191
Transfer RNA biogenesis [BR:
dol03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Dole_3191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Arm_4
Motif
Other DBs
NCBI-ProteinID:
ABW68994
UniProt:
A9A075
LinkDB
All DBs
Position
complement(3823134..3824282)
Genome browser
AA seq
382 aa
AA seq
DB search
MADDPQQPFTFVNTPSGLAQVVHRLERVPVVAVDLEADSLHHFTEKVCLIQIGVNGDAFL
IDPLALSDLSSLKPFFADPGVIKVLHGADYDVRSLYRDFGITITGLFDSEIASRFLGVQS
TGLNDVVNRRFGVTMDKGCRKQDWTQRPLPEKMLSYAALDVRYLVDLYHQLQNELQQMGR
AEWVAEECELLSRVRYANGEDTPLFVRFKGAGRLSRRTLAVLEALLVARQKMARKKDRPP
FKVMGNDALLRLAQERPRNRKALEAMGVFSKKQLPMVADGVLAAVERAMVLPDSQLPVYP
RTRQPALPRAAARRVEILKQWREKAATRLCLDPGLLFPKSLVTAVAQEGPKTLADLGRVE
GVRRWQVEALGPEMLEALGSGR
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgacccccagcagcccttcacctttgtaaacaccccttccggccttgcgcag
gtggtccaccgccttgagcgggtgccggtggtggccgtggacctggaggccgactccctg
caccattttacggaaaaggtctgcctgatccagatcggcgtaaacggtgacgcctttttg
atcgaccccctggccctttccgatctttcctccttaaaacccttttttgccgatcccggc
gtcataaaggtgttgcacggcgccgattacgatgtccggtccctttaccgggatttcggc
atcaccatcaccggcctgtttgacagcgaaatcgccagccggtttctgggggttcaatcc
accgggctcaacgacgtggtgaacaggcggttcggcgtcaccatggacaaggggtgccgc
aagcaggactggacccagcggcccctgccggaaaagatgctgagctacgcggccctggac
gtgcgttacctggtggacctttaccatcagttgcaaaatgagttgcagcagatgggccgg
gccgaatgggtggccgaggagtgcgaacttttaagccgcgtccggtacgcaaacggggaa
gacacgcccctgtttgtccggttcaaaggggctggccgcctgagccggcgcaccctggcc
gtgctggaagccctgctggttgcaagacagaagatggcccggaaaaaagaccgccccccg
ttcaaggtcatgggcaacgatgccctgctcaggctggcccaggagcggccccggaaccgg
aaggccctggaggccatgggcgtgttttcaaaaaagcagcttcccatggtggccgacggg
gtcctggccgctgttgaacgggccatggtcctgccggacagtcaactgccggtctatccc
cggacccggcagccggccctgcccagggccgcggcccgccgggtggagattttaaagcag
tggcgggaaaaggcggccacccggctgtgcctggacccgggcctgctctttcccaagtcc
ctggtgacggccgtagcccaggaggggccgaaaaccctggccgacctgggccgggtcgag
ggcgtgagacggtggcaggtcgaggccctggggccggaaatgctggaggctcttggttcg
gggcgatga
DBGET
integrated database retrieval system
