Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016: RRU94_09330
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Entry
RRU94_09330 CDS
T09442
Symbol
helD
Name
(GenBank) RNA polymerase recycling motor HelD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dom
Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016
Pathway
dom03420
Nucleotide excision repair
dom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RRU94_09330 (helD)
03430 Mismatch repair
RRU94_09330 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dom03400
]
RRU94_09330 (helD)
Enzymes [BR:
dom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RRU94_09330 (helD)
DNA repair and recombination proteins [BR:
dom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RRU94_09330 (helD)
MMR (mismatch excision repair)
Other MMR factors
RRU94_09330 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
NACHT
SLFN-g3_helicase
DEAD
GvpD_P-loop
Pup_ligase
AAA_16
SMC_N
Motif
Other DBs
NCBI-ProteinID:
WNS81011
UniProt:
A0AA96N7Y1
LinkDB
All DBs
Position
2:complement(266778..269105)
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AA seq
775 aa
AA seq
DB search
MNQETEQLKEQQRVNEVIDLIDRKEEDIKEKTGSLKEGIIGLRKNFWEDVTVNMDEPDDV
IETQAGIKQQAELLQERERSHRQLFNELKKLDRLRRSPYFGRIDFQESGEPKPEPIYIGI
ASLMDEAQENFLIYDWRAPISSMYYDYTTGPAAYDTMEGRIEGEISLKRQFIIQQGEITG
QFDTSLTIGDHILQAVLGGKSSAQMKNIVATIQREQNQIIRNQKSQTLIVQGAAGSGKTS
AALQRIAFLLYANRRTLRAENMLLFSPNPLFNSYVSTVLPELGEENILQTTYKEYVEDRI
GNAFTVQSPFEQLEQFLLEGTEQENPAEAASVQFKASLDFKKIIDDYLTSLSQKGLLFHD
IVFRDKVLISSEEIREHFYTLATSILLPNRLELVSEWLLKKLQKLERLEQNEEWVRDEVE
LLDKEDFLNAYRARQKKQSKEEDTFNDVDMEWRILSKSVVRKQFQPLRNKIKRLGFVDER
ANFRQLFETRTQTAPPIWASVCAKTLETLDQHTLDWEDATAYLYFQDQLKGKKSFSHIRH
VFIDEAQDYSPFQLAYLKTLFPYSKMTLLGDVNQSIFVQALNESSVLTDTPDNKESYEKI
TLTRSYRSTRPIVEFTQQLIEGGEQIEAFNREGTKPTLTYANHEEDLQQKLLTRIRSMLE
GDQHQTIAVICKTMQESQRVHAWLSSHIPAQLLDQETYTFEQGLVVIPTYLAKGIEFDAV
LLFNISEDVYGREWERNLFYTACTRAMHELHLFSSGKETPLMQAVEPQTYTIIEN
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggaaacagaacagctgaaagaacagcagcgtgtaaacgaagtgattgatctg
atcgaccgaaaggaagaagacatcaaagaaaaaacaggctctttgaaagaaggtattatc
ggtcttcgcaaaaacttttgggaagatgtaactgtcaatatggacgagccagatgatgtc
attgaaacacaagccggcattaagcagcaggccgaattgcttcaggaaagagaaagaagc
cacaggcagctgtttaacgagctgaaaaagctggaccggctgcgtcgttccccttatttt
ggccgcattgatttccaggaatccggcgaaccgaagccggaacctatttacattggcatc
gcttccttaatggatgaagcacaggagaattttttaatttatgactggcgggcccctatt
tcaagcatgtactacgattacacaacagggcccgctgcttacgatacgatggaaggccgg
attgaaggagagatctctttaaaacggcagtttatcattcagcagggggagattaccggc
caattcgatacaagcttaacgatcggcgatcatattttgcaggcggttttgggcggaaaa
tcaagcgcgcaaatgaaaaatattgtggccaccattcaaagggagcaaaatcaaattatc
cgcaatcaaaaaagccagacgctgatcgtgcagggagcagccggcagtggaaaaacatcg
gccgcgctgcagcgcattgcttttttgctgtacgccaaccgccggacattgcgggcagaa
aatatgcttttattttcgcccaacccccttttcaatagctatgtgtctacggtactgcct
gagctcggagaggaaaatattctccagacaacctataaagaatatgtagaggaccggatt
ggtaatgccttcaccgttcaaagcccgtttgaacagctggaacagtttttgctggaggga
acagagcaggagaatcctgctgaagcagcatctgttcaatttaaagcgagtctcgatttt
aaaaagattattgatgattatctcacttctctgtcgcagaaaggcctcctttttcacgac
attgtctttcgagataaagttctcatttcttcggaagaaataagagagcacttttataca
ttagccacttccattttgctgccgaaccggttagagcttgtatcggaatggctgctgaaa
aagcttcaaaaactggagcgccttgaacaaaacgaagaatgggtgcgggacgaagtagag
cttttagataaagaagattttttaaacgcgtaccgcgcgcgccagaaaaaacaatcgaag
gaagaagatacctttaacgatgtagacatggagtggcgtattttaagcaaaagcgtcgtg
cgcaaacaattccagcctttaagaaacaagataaagcggcttggctttgtggatgaaaga
gccaatttccggcagctgttcgagacacgtacgcagacggccccgcctatttgggcttct
gtttgtgccaagacactcgagacactggaccagcacacccttgactgggaagacgcaacc
gcttatttgtattttcaagaccaattaaaagggaaaaagtctttttcccatatccgccac
gtttttattgatgaagcacaggattattcaccctttcagcttgcgtatttaaaaacactg
tttccatacagcaaaatgacactgctgggagatgtaaaccagtccatctttgtgcaggcc
ttgaatgaatcatccgttttaacagacacaccggacaacaaggaatcgtatgaaaaaatt
acactaacgcgcagttaccgatccacccggccgatcgtcgaatttacacaacaattgatc
gaaggcggcgaacaaattgaagcatttaaccgggaagggacaaaaccgactttaacatat
gcgaatcatgaagaagaccttcagcaaaagctgttaacgcgtattcgctcaatgcttgaa
ggagaccagcatcagacgatcgctgtgatctgtaaaacgatgcaggagagccagcgtgta
cacgcgtggctgtcgtctcacattcccgctcaactgctcgaccaggaaacgtacacgttt
gagcaggggctggtcgtcattcctacttatttagcgaaaggaatcgagtttgatgcggtt
ctgctttttaacatatctgaagatgtatacggacgggaatgggagagaaacttgttttat
actgcctgcacccgcgccatgcatgagcttcacctgttttcgtcaggaaaagaaacgccg
cttatgcaggccgtcgagccccaaacgtataccattatcgaaaattaa
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