Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016: RRU94_10945
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Entry
RRU94_10945 CDS
T09442
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dom
Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016
Pathway
dom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RRU94_10945 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dom03019
]
RRU94_10945 (recQ)
03400 DNA repair and recombination proteins [BR:
dom03400
]
RRU94_10945 (recQ)
Enzymes [BR:
dom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RRU94_10945 (recQ)
Messenger RNA biogenesis [BR:
dom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RRU94_10945 (recQ)
DNA repair and recombination proteins [BR:
dom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RRU94_10945 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
HTH_7
Motif
Other DBs
NCBI-ProteinID:
WNS81316
LinkDB
All DBs
Position
2:624768..626894
Genome browser
AA seq
708 aa
AA seq
DB search
MLEEARSFLQSHFGYDSFRTGQEQAITNVLSGENTICVMPTGGGKSLCYQIPALVLEGTT
IVVSPLISLMKDQVDTLLAAGIPAAYINSTMTGADIYETIKAARNGEYKLLYIAPERLES
YSFIEDLKELTVPLIAVDEAHCISQWGHDFRPSYRHIQRMTELFPNNPVVLALTATATPH
VREDICRLLSIEEENTVITGFERKNLSFSVVQGQDRNSFLKDYLKKNEKESGIIYAATRK
TVDGLHERLQRAGISVARYHGGMSDVERAREQDRFLADEATVMVATNAFGMGIDKSNIRY
VIHYQLPKNMESYYQEAGRAGRDGLDSECIVLYSSQDVQTQRFLIDQALERDRIPQELEK
LQGMVDYCHTEKCLQQFIVAYFGDPGAKPCGRCGNCTDSRSSVDVTKEAQMVLSCVIRMG
QRFGKAMTAQVLTGSRNKKLIEFGFDSLSTYGILKQQSVKDVTNFIEFLISQELIGVEQK
QFPTIFVTEQGREVLLGRETVMRKEAVQTKKIAADDPLFDVLRALRKNIAEEAGVPPFVI
FSDNTLHDMCAKLPMDEEDFLSVSGVGESKMAKYGAAFLTAIKAYTEENPDRQRDLITES
AAAAPKKKSVNSYLDTLQLHQKGMAAEAIAAERNLTVGTVENHLIQCMEEGLDVNLGLLV
PVHHHEVLKRAVEEAGADRLKPIKEQVPEEVTYGMIKAFLEMRRRNHV
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgctggaagaggcacgcagctttttgcagtcgcatttcggctatgattcattccggacg
ggccaggagcaggcaataaccaacgtattaagcggtgaaaatacgatttgtgtgatgccg
acaggcggagggaagtcgctctgttatcagatcccggcgcttgtcctggaaggaacaacg
attgtggtctcgccgcttatttccttaatgaaggatcaagttgatacgctgcttgcggca
ggaatcccggcggcatatattaacagcacgatgacgggtgcagatatatatgaaaccatc
aaagcggcgcgaaacggagaatacaagctgctttatatagcgccggaacggcttgaatcg
tattcgtttattgaagatttaaaggagctgacggtaccgctgatcgctgtggacgaggcg
cactgtatttcgcagtgggggcatgatttccggccaagctaccgccatattcagcggatg
accgagctgtttccaaacaatcctgttgtgcttgcgctgactgcgacggctacgccgcat
gtgcgcgaggatatttgccgtcttctttctattgaagaggaaaatacggttattaccgga
tttgaacggaagaacctatcattttctgtcgttcaaggacaagaccggaacagcttttta
aaagactatttaaagaaaaacgaaaaggaatcaggcattatttatgccgcgacccggaaa
acggtcgacgggctacatgaacgcctgcagcgggcgggcatttccgttgcccgttatcac
ggcggaatgagcgatgtggagcgggcacgggagcaggaccggtttttagcagatgaagca
accgtaatggtcgccaccaatgcatttgggatggggattgataagtctaacatccgctac
gtcattcattaccagctgcctaaaaatatggaaagctattatcaggaggccggccgtgca
gggcgtgatggccttgacagtgagtgtattgtgctttattcgtcgcaggatgtacagaca
cagcgctttttaattgaccaggcgcttgaacgcgaccgcattccgcaggagcttgaaaaa
ctgcagggcatggtggattactgccatacagaaaaatgcctgcagcaatttattgtggcg
tattttggtgatccaggtgccaagccgtgcggccgctgcggcaactgcaccgattcacgc
agcagtgtcgatgtaacaaaagaagcgcaaatggtgctttcctgcgtaatccggatggga
cagcggtttggtaaggcgatgacagcacaggtgctcacagggtcacgcaataaaaaactg
atcgagttcggttttgacagcttgtctacttacggtattttaaagcagcaaagcgtgaag
gatgtaactaactttattgagtttttaatttcgcaggagctgatcggcgtcgaacaaaaa
cagtttccgaccatttttgtgaccgagcagggacgggaggttttgctgggcagggagacc
gtgatgcgcaaggaagcggtacaaacgaaaaaaattgccgcagacgacccgctgttcgat
gtactccgtgcgcttcgtaagaatattgcggaggaagcgggcgtaccgccatttgttatt
ttttcggataacacacttcacgatatgtgtgccaagctgccaatggatgaagaagatttt
ctttctgtcagcggcgtcggagaaagcaaaatggcgaaatacggagctgcatttttaact
gcaatcaaagcgtacacagaagaaaacccggatcggcaaagagacttgatcactgagtcc
gccgcagccgctccaaagaaaaaatcggttaactcctatttagatacactccagctgcat
caaaaaggaatggctgccgaagcgattgcagcggaacgaaacctgacagtcggaacggtc
gaaaatcatttgattcagtgcatggaagaaggacttgatgtgaatctcggtctgcttgtg
ccggttcatcatcatgaagtgcttaagcgggctgttgaagaagcaggagcggaccggctg
aagccgattaaagagcaggtgccggaagaagtaacctatggcatgatcaaagcgttttta
gagatgcggaggcggaatcatgtttga
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