Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016: RRU94_13295
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Entry
RRU94_13295 CDS
T09442
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dom
Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016
Pathway
dom03030
DNA replication
dom03430
Mismatch repair
dom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RRU94_13295 (dnaE)
03430 Mismatch repair
RRU94_13295 (dnaE)
03440 Homologous recombination
RRU94_13295 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dom03032
]
RRU94_13295 (dnaE)
03400 DNA repair and recombination proteins [BR:
dom03400
]
RRU94_13295 (dnaE)
Enzymes [BR:
dom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RRU94_13295 (dnaE)
DNA replication proteins [BR:
dom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RRU94_13295 (dnaE)
DNA repair and recombination proteins [BR:
dom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RRU94_13295 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
DNA_pol_IIIA_C
DUF655
DUF4880
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
WNS81735
UniProt:
A0AA96N844
LinkDB
All DBs
Position
2:1074703..1077969
Genome browser
AA seq
1088 aa
AA seq
DB search
MIQLETETAYSFRGATLTPEQIAQKTQEAGQKAVALTDWNNLHAAIPFYLACQKRGIKPI
MGLKAEVEAQQESDRAYPLLLYAQNDNGFSNLIKISSALQTKAEAGLPLRWLNGYAKDLI
AVLPGLDGDPSGEALAFFKEIFQHFYIGLRGTRAERFLIEKARADGIPVVAIGHVQYADP
AGAFASACLQAIRDNRLIEPEEELTEAAYAFKSEAEWKELYQDIPEAMDNTAVIAKLCNV
NIKFGSRLLPAFPLPEGESADERLKNLCMEGLRDRSDSAYIERLSYELSVISRMNFSDYF
LIVHDFVHFAKKQGILTGPGRGSAAGSLVAFALGITAVDPIRHNLLFERFLNPERITMPD
IDIDFPDYRRDEVIRYIAQKYGAVHAAQIVTFGTLSAKAVMRDTARVFGFDSGELSRLSK
LISSTPGTKLSQVNLEGWRAESPVHERIYQTALRLEGLPRHTSTHAAGIVMTEKPLTDHV
PIMKGHDEVYLTQYPMEPLEQLGLLKIDLLGLRNLTTIERIIASIRRKTGRRIDLLSLSL
DDHDVFKLLGEGKTAGIFQFESEGMKNVLTQLQPNRFEDMVAVNALYRPGPMEQIPTYIK
RRHGQESLQYPHPVLKEILEPTYGIIVYQEQIIQIAVQLAGFTPGEADLLRRAVSKKKKE
TLEQERKHFVSGAVQNGVDENIALFVYDLIVRFADYGFNRSHAVAYSMIAYWLAWLKVHY
PAHFLAALLQSQTGNEEKMRQYAAEAAEYDLSFLAPSVNMSGYSFQAEQGGIRFGLVPIK
GVGQTVAKTIIEERKESRFQDLFDFCQRVPVNIVNRKAIESLIYAGAMDEFGQDRAVLLA
SIDAAIEHAALIQPDEGSLFEGLGVSFHPKYADVTGLPVDIKLEKEREMLGLYVSDHPIA
LHRKVLAQAGAVPVIKVQASRKVITAGMIGSIREIRTKKGDKMAFSSIADETGEREMILF
PEVYRKHGPFIEKGKAVLLKGAAEERNGSLQLIVQSLEPIQEGINKTMEKKQVLFIQLPE
GKGESELAGWVVEELQLYPGQASVVIHYERTKETVRLGPKYKVSPKEELIEGLKKRCGTR
NVVLKSFD
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
gtgatccagctggaaacggaaacggcatacagctttcgcggcgcgacgctcacgccagag
caaatcgctcaaaaaacgcaggaagcgggccaaaaggcggtcgcgctgacagattggaac
aacctgcatgcagctattcctttttatcttgcctgccaaaagcgcggcattaagcctatt
atgggattaaaagcggaagtggaagcccagcaggagagtgatcgggcatatccgcttctt
ttgtacgcgcaaaatgataatggcttttcaaacttaattaaaatttccagtgctctgcag
acaaaagcagaagccggtcttccgcttcgctggctgaacggatatgccaaggatctgatt
gccgttctgccaggcctagatggtgatccttccggggaagcactggctttttttaaagag
atttttcagcatttttatatcgggcttcgtggaacgcgggctgaacgttttttaatagaa
aaagcaagggctgacggcattccggttgtagccattggccatgttcagtatgccgatcca
gcaggcgcttttgcttcagcatgcctccaggccatccgggacaaccggcttattgaaccg
gaagaagaattaacggaagcggcgtatgcttttaagtccgaggctgaatggaaggaactc
tatcaagatattccggaagcaatggacaatacagcggttattgccaagctctgcaatgta
aacataaaatttggcagcagacttcttcctgcatttcctctgccagagggagaaagtgcc
gatgaacggctgaaaaatttatgtatggaagggctgagggaccgaagtgattcagcttat
atagagcgcctttcctacgagctgtctgtaatcagcagaatgaatttcagtgattacttt
ttaattgttcatgattttgtacactttgccaaaaaacaaggaattctgacagggccgggc
cggggatccgctgccggatctcttgtagcctttgcccttggtattaccgcagtagatcct
atccgccataatctcttatttgagcggtttttaaatccggagcggattacgatgccggat
attgatattgattttccagattatcgtcgtgatgaggtaatccggtacatcgctcaaaaa
tatggtgctgttcacgccgcgcaaattgtaacgttcggtacattatcagctaaagcggtg
atgagagacacagccagggtcttcggttttgacagcggagaattatcacggctgtcaaag
cttatttcgtcgacaccaggaacaaagctttcgcaggttaacttagagggctggcgggcg
gagtcacctgttcatgaacgcatttatcaaacggcactccgcctggaaggactgccgcgc
catacctctacacatgcagcgggtatcgtgatgactgaaaagccgctcactgaccatgtg
cccatcatgaaggggcatgacgaggtgtatttaacgcaatatccaatggagccgcttgag
cagctggggcttttaaaaatagatttgctgggcttgcgcaatttaacaacaatcgaacga
atcatcgcttctattcgaagaaaaaccggccggaggatagacttattgtcgctttcgcta
gatgatcatgatgttttcaagctgcttggagaaggaaaaacagccggtatttttcaattt
gaatctgaaggaatgaaaaatgttctcacgcagctgcagccaaaccgcttcgaagatatg
gtagccgtgaatgccttataccgccccggcccaatggaacagattcctacctatattaaa
cggcggcatggacaggaatcgcttcaatatccacatcccgttttaaaagagatactagag
ccgacgtatggcattattgtctatcaggagcagattattcaaatcgctgtgcagctagcc
ggcttcacacccggagaagccgatttgctgcgccgtgctgtaagcaaaaagaaaaaagag
acattggagcaggagcgaaaacattttgtcagtggtgctgttcaaaacggtgtggatgaa
aacatcgctcttttcgtgtacgacttgattgtccggtttgctgactacggctttaaccga
agccatgcggttgcctacagtatgatcgcatactggcttgcctggctgaaggttcattat
cctgcccattttctagcagcgcttttgcaatctcaaacgggaaatgaagaaaagatgcgg
caatacgcagcggaggcagcggagtatgatctttcttttctcgcaccctctgttaatatg
agcggctattcatttcaagccgaacaaggtgggattcgatttggtcttgtgccgataaaa
ggagtgggccagacggttgccaaaacgattatagaggagcgcaaagagagccgttttcag
gatttgtttgatttctgccagcgggttccggtgaatattgtgaatcgaaaagcaatcgaa
tcactgatttatgcaggagcgatggatgagtttggccaggatcgtgcggtgctgctggcc
agtattgatgccgccatagaacacgcagctcttattcagccggatgaagggagtttattt
gaagggcttggtgtatcgttccatcctaaatatgcggacgtaactggacttcccgtagat
ataaaactggaaaaagaacgggaaatgctcggtctgtatgtttcggatcacccgatagcg
cttcatcgaaaggtgcttgctcaagccggtgccgttccggtgataaaggttcaagccagc
cgaaaagtcatcacagcaggaatgatcggaagcattcgtgagatccgcacgaaaaaaggc
gataaaatggctttttcctctattgcagatgaaacaggagagcgggaaatgatcttattt
ccggaagtgtaccgaaaacatggcccatttattgaaaaagggaaagctgtacttttaaaa
ggagcagcagaagaacgaaacggcagtctccagcttattgttcagtctcttgaaccgatt
caagaaggaataaacaaaacgatggagaaaaaacaagttctttttatccagctgccggaa
ggaaaaggagaaagtgagctggcaggctgggtagtggaagagcttcagctttatccgggc
caggcctcggtggtgatccattatgaaaggacgaaggaaacagtaaggctcgggccgaag
tataaagtatcaccgaaagaagagttgattgaggggctgaaaaaaaggtgtggaacacgc
aacgttgtgcttaaatcctttgactaa
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