Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016: RRU94_14325
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Entry
RRU94_14325 CDS
T09442
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
dom
Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016
Pathway
dom02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dom00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RRU94_14325 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dom03021
]
RRU94_14325 (rpoD)
Transcription machinery [BR:
dom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RRU94_14325 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
DUF2316
tify
Pox_G7
DUF2408
Motif
Other DBs
NCBI-ProteinID:
WNS81933
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All DBs
Position
2:1280952..1282079
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AA seq
375 aa
AA seq
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MAEKSTRSKEAELTLEKAKELIIETGKQRGELTYNYVADKLASFEVDSGQIDEFYESLTE
QGVELVDEAESNDDGDPNIQELEKENEEFDLNDLSVPPGVKINDPVRMYLKEIGRVDLLS
AQEEIELAHRIEEGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVE
KFDYRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRE
PAPEEIAEEMDLTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEATSPSEHAAY
ELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRK
LRHPSRSKRLKDFLE
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaagtcaacacgttccaaagaagctgaattaacacttgaaaaagcaaaagaa
cttattatcgagacaggtaaacaaagaggagaattaacatacaattacgtagcggacaaa
ttagcctcgtttgaagtggattccggtcagattgatgagttttacgaatcccttacagag
cagggagtagaactcgttgatgaagcagaaagcaacgatgacggcgatccgaacatccag
gagcttgaaaaagaaaatgaggagtttgatttaaacgacttaagtgttcctcctggagtg
aaaatcaacgatcccgttcgtatgtacttaaaagaaattggccgtgttgatcttttgtct
gcccaggaagaaattgaactggctcaccggattgaagagggagatgaagaagcaaaacga
cgtttagcagaagcgaacctgcgtcttgttgtcagcattgccaaacgttatgtaggccgt
ggcatgctgttccttgatttgattcaagaaggaaatatgggcttaatcaaagcggttgaa
aagttcgactaccgtaaagggtttaaattcagtacgtatgccacatggtggattcgccag
gctattacccgtgccattgctgaccaggcccgtaccattcgtatcccggttcatatggtt
gaaacgattaataaattaattcgtgtacagcgccagcttcttcaggatcttggccgcgaa
ccggcaccggaagaaattgcagaagaaatggatctaacacctgaaaaagtacgtgaaatt
ttaaagattgcgcaagagcctgtttcacttgaaacaccaattggggaagaagatgattca
catcttggcgactttattgaagaccaggaagcgacttctccgtctgaacacgctgcttat
gagttgttgaaagagcagcttgaagacgtgctcgataccttaacggaccgggaagaaaat
gttcttcgcctgcgtttcggccttgatgatggacggacacggacacttgaagaagtaggt
aaagtatttggtgtaacgcgtgagcgtatccgccaaattgaagcaaaagcccttcgtaag
ctccgccatccaagccgcagcaaacgtttgaaggatttcttagaataa
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