Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016: RRU94_16300
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Entry
RRU94_16300 CDS
T09442
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
dom
Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016
Pathway
dom00300
Lysine biosynthesis
dom00470
D-Amino acid metabolism
dom01100
Metabolic pathways
dom01110
Biosynthesis of secondary metabolites
dom01120
Microbial metabolism in diverse environments
dom01230
Biosynthesis of amino acids
Module
dom_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
dom_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dom00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RRU94_16300 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RRU94_16300 (dapF)
Enzymes [BR:
dom01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RRU94_16300 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WNS82297
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All DBs
Position
2:1650156..1651145
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AA seq
329 aa
AA seq
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MLEISYIKGHGSGNDFILIDEWTNAYTFTEENRRDLALALCDREKGIGADGIVFVMESAH
ADAKMRIFNSDGSEASMCGNGLRLHGRYVLDKLGENEIIVETNKADLYVKRDGDIYEGVP
AYRVQISPVLFNLADLPMTIGKERLFDEMVPELSDSIRFSALAVPNPHLIVVADRELIAS
DEQKRISEMLNGKNDITPDGVNVSFVYPIQKGALYVRTFERGVGFTNACGTAMSASTLTT
CQLGLNDMEAPIDVYNNGGKVRCEVHVHEDGQYSIDLIGNGTYMFGGTISIDLDTPAHFT
VHNQEAFAEQNAYEQLREEVEAYLASTVF
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgttggagatttcgtatattaaaggccatgggtcgggaaatgattttattttgatcgat
gagtggacgaatgcatatacatttacagaagagaaccgccgcgatctcgctttagcgctt
tgcgaccgggaaaagggcattggagctgacggaattgtatttgtaatggaaagcgcgcat
gccgatgcgaaaatgcgtatttttaacagtgacggttcggaagcgtccatgtgcggcaac
gggctgcgtttgcatggacggtacgtgctggataaacttggggaaaatgagattatcgtt
gagacaaacaaagccgatctttatgtgaagcgagacggcgatatttatgaaggcgtgccg
gcataccgtgttcaaatttcaccggtcctgtttaatcttgcggatctgccaatgacgatc
ggaaaagaacgtttgtttgatgaaatggtgcctgaactgtctgattcgatccggttctct
gcgctcgccgtaccgaaccctcatttaattgttgtggcagaccgggagcttattgcttca
gatgagcaaaaacggatttcagaaatgctgaacgggaaaaacgacattacgccagatggt
gtaaacgtcagctttgtgtatccaatccaaaaaggagcgctgtatgtgcggacgtttgag
cgcggcgttggcttcaccaatgcatgcggtacagcgatgtccgcttctacgctgaccaca
tgccagctcggtttaaacgacatggaagcgcctattgatgtatacaacaatggggggaaa
gtccgctgcgaagtgcatgtgcatgaagacggacaatattctattgatttaatcggaaac
ggaacgtatatgttcgggggtacaatcagcattgatcttgatacgccggctcattttacc
gttcataaccaggaggcgtttgctgaacaaaacgcctatgagcaattgcgcgaggaagta
gaagcgtatctggcttcaaccgttttttaa
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