Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016: RRU94_19185
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Entry
RRU94_19185 CDS
T09442
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
dom
Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016
Pathway
dom02024
Quorum sensing
dom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RRU94_19185 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RRU94_19185 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dom03019
]
RRU94_19185 (hfq)
03036 Chromosome and associated proteins [BR:
dom03036
]
RRU94_19185 (hfq)
Messenger RNA biogenesis [BR:
dom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RRU94_19185 (hfq)
Chromosome and associated proteins [BR:
dom03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
RRU94_19185 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
WNS79644
LinkDB
All DBs
Position
2:complement(2184482..2184712)
Genome browser
AA seq
76 aa
AA seq
DB search
MKQPINIQDQFLNQLRKENTMVTVFLLNGFQLRGLIKGFDNFTVLVETDGKQQLVFKHAI
STFAPQRSVNLNFEEQ
NT seq
231 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagccaattaacattcaagaccaatttctaaaccagctgcgcaaagaaaatacg
atggttaccgtatttttactgaatggatttcagctgcgcgggctgattaaaggatttgat
aactttaccgttctggtagaaaccgatgggaaacagcagcttgtgtttaaacatgccatt
tcgacatttgctcctcagcgcagcgtcaacttgaatttcgaagaacaataa
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