Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016: RRU94_19435
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Entry
RRU94_19435 CDS
T09442
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
dom
Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016
Pathway
dom03030
DNA replication
dom03430
Mismatch repair
dom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RRU94_19435
03430 Mismatch repair
RRU94_19435
03440 Homologous recombination
RRU94_19435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dom03032
]
RRU94_19435
03400 DNA repair and recombination proteins [BR:
dom03400
]
RRU94_19435
Enzymes [BR:
dom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RRU94_19435
DNA replication proteins [BR:
dom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RRU94_19435
DNA repair and recombination proteins [BR:
dom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RRU94_19435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
WNS79692
UniProt:
A0AA96N439
LinkDB
All DBs
Position
2:complement(2239289..2243599)
Genome browser
AA seq
1436 aa
AA seq
DB search
MKEVSSGRSRFLILLDQLRLTEDAVVRHFEGTEIKKLTVLKQEKKWHFVFAAPALIPCNV
LMRFADSLSATFATFASVTFSMEVQDRTCTPEHIIDYWPYCVRQLEGMAPPLLATLNGQK
PEVSGTKLVIGTQNEMEGMALKNKYGRRLCEVYESLGFPPLTFDIQVSQNERNEEYEKFL
EEKRKEDAERARQAVIDMQNRAKEQDEAPEESGPVTIGYMIKPDAEFKKLEEIVDEERRI
ASEGYIFDAETKELRSGRTLLTFKITDYTDSLMVKMFSRDKEDAAMFNRIKKGMWVRVRG
SVQNDTFVRDLVMIANDVNEIRSPMREDTAEEKRVELHLHSPMSQMDAITSISTLVGQAK
KWGHPAIAITDHAVAQSFPEAYSAGKKHGVKILYGMEANLVNDGVPIAYEDADRELATDT
YVVFDVETTGLSAVYDTIIELAAVKIKDGEIIDRFERFANPHHPLSATTIELTGITDDMV
QDAPEVDEVLRDFKEWTGDAILVAHNASFDMGFIQTGYKKYAIGRTSNPVIDTLELARLL
YPDMKNHRLNTLAKKFDVELTQHHRAIYDAEATGYILLKLLKDADEKGIKKHNEFNNFMG
EGGAYKRARPYHCTILAQNAEGLKNLFKLVSLSHINYFYRVPRIPRSVLQKHRGGLLIGS
GCNKGEVFEAMMQKGMDEARQAAEFYDYLEVQPKAVNAPLIEMELVRDEAGLEDIIRNIV
TIGEEQNKLVAATGNVHYLNEEDKVYRHILISSMGGANPLNRQTLPDVHFRTTDDMLDAF
SFLGKEKAHEIVVANTNKIADMIEEVKPIKDDLYTPKIEGADEEMREMSYGMARKIYGDN
LPEIVEARLEKELKSIIGHGFAVIYLISHKLVKKSLDDGYLVGSRGSVGSSFVATMTEIT
EVNPLPPHYVCSSCKKSEFFDDGSVGSGFDLPDKDCPNCRIPYKKDGHDIPFETFLGFKG
DKVPDIDLNFSGEYQPRAHNYTKELFGEDYVFRAGTIGTVAEKTAYGYVKKYAEEYTKQY
RSAEVDRLVSGCTGVKRTTGQHPGGIIVVPDYMDIYDFSPIQYPADSDKSEWKTTHFDFH
SIHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFSGTESLGVTEEQIMC
KTGTLGIPEFGTRFVRQMLEETKPTTFSELVQISGLSHGTDVWLGNAQELIQKGICQLSD
VIGCRDDIMVYLIYQGLEPAFAFKIMESVRKGKGLTEEMEEEMRKNEVPEWYIDSCKKIK
YMFPKAHAAAYVLMAVRIAYFKVHLPLLYYAAYFTVRAEDFDIDVMSKGSSAIKALLQEI
NAKGLDASPKEKNLMTVLELALEMVERGFTFKKVDLYRSSADEFVIDGNSLIPPFNALPG
LGTNAAKNIVASREHGEFLSKEDLQQRGKVSKTIMEYLEKMGCLDALPDQNQLSLF
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagtatcaagtggacggagccgctttttaatcctgctggaccagcttcggcta
acagaagatgcagtggtccgccactttgaaggaaccgaaatcaaaaaattaaccgtatta
aaacaagaaaaaaagtggcattttgtatttgcggccccagcgctgattccgtgtaatgtt
ctcatgcggtttgccgattcgctgtctgccacatttgccacatttgcctcggttactttc
tcaatggaagtgcaggatcgcacgtgcacaccggagcatatcatcgattactggccgtat
tgcgtccgccagcttgaaggcatggcacctccgcttttagcgacattaaatgggcaaaaa
ccagaggtatcagggaccaagcttgtgatcggcacccaaaatgaaatggaaggcatggcg
ctcaaaaataaatatggacgccgtttgtgtgaagtgtatgaaagtctcggatttccgccg
ctgacatttgacatacaagtttcccaaaacgagcgaaacgaagaatatgaaaagttttta
gaagaaaagcgcaaagaagatgcggaacgagcacgccaggcagtcatcgatatgcaaaac
cgggcaaaagagcaggatgaggctccagaagaatccggccctgtgacgattggttatatg
atcaagcccgatgcagaatttaaaaagcttgaagaaattgttgatgaagagcgccggatt
gcttcagaagggtatattttcgacgcagaaacgaaagagctgcgcagcggccgtacgctg
ctcacttttaagattaccgactacacggactccttaatggtcaaaatgttttcgcgtgat
aaagaagacgctgcgatgtttaaccgtattaaaaaaggcatgtgggtacgtgtgcggggg
tctgttcaaaatgacacctttgtccgtgacctcgtgatgatcgccaatgatgtaaatgaa
attcgttccccgatgcgggaagatacagcagaggaaaaacgggtggaacttcatcttcat
tcaccgatgagccagatggatgccataacttccatcagcacattagtcgggcaggcaaaa
aaatgggggcatccggctatcgctattaccgatcatgcagtggctcagtcgttcccggaa
gcatacagtgccggaaaaaaacatggcgtaaaaattttatatgggatggaagccaatctc
gttaatgacggtgtgccgatcgcatatgaagatgccgaccgggagcttgctacagacacg
tatgtggtttttgacgttgaaacgacgggtctttcagcagtatacgatacgattattgaa
ctggcagcagtcaaaataaaagacggtgaaattattgaccggtttgaacgatttgccaac
ccgcatcatccgctgtctgcaacaaccattgaactgaccgggattaccgatgacatggta
caagatgcacctgaggtagacgaagtgctccgtgatttcaaagagtggaccggggatgcc
atcttggttgcgcataatgcgtcgtttgatatgggctttattcaaacaggctacaaaaag
tatgctataggccggacctcaaatccagtgattgatacactggagctggcacgtttactg
tacccggatatgaaaaatcaccggctgaacacactggcgaaaaaattcgatgtagaatta
actcagcatcaccgcgcgatttacgatgcggaagcgacgggatacatcctgcttaaattg
ttaaaagatgcagatgaaaaagggattaagaaacataatgagttcaataactttatgggg
gaaggcggggcctataaacgtgcacgcccttaccactgtacgattcttgcccaaaatgca
gaagggctgaaaaatttatttaagcttgtgtccctctcgcatatcaattacttttaccgt
gtgccgcgaatcccgcgttctgttttgcaaaaacaccgcggcggcttgctgattggctcc
ggctgcaacaaaggggaagtatttgaagcgatgatgcaaaaagggatggacgaagcacga
caggctgctgagttttatgattatttagaagtgcagccgaaagccgtaaatgcgccgctg
attgaaatggagcttgtacgtgatgaagcagggcttgaagatattattcgaaacatcgtc
accattggagaagaacaaaacaaactagttgccgcaaccggcaatgttcattatttaaat
gaagaagacaaagtgtaccgccacattttaatttcatctatgggcggagccaatccatta
aatcgccagacactgccggacgttcacttccggacaacggatgatatgcttgacgctttt
tcatttttggggaaagaaaaagcgcatgagatcgttgtggccaacacgaataagatcgct
gatatgatcgaagaagtcaaaccgattaaggacgatctgtatacgccgaaaattgaaggc
gctgacgaagaaatgcgggaaatgagttatggtatggcacggaagatttatggggataac
ctgccagaaattgtagaagcgcggcttgaaaaagaattaaaaagtatcatcggccatgga
ttcgcggttatttatctaatttcgcataagctggtgaaaaagtcgcttgatgacggttac
ctggttggctcacgcggatcggtcggttcgtcatttgttgccacaatgaccgaaataaca
gaagtaaatccgctgcctccgcactatgtatgctcatcgtgcaaaaaatccgagttcttt
gatgatgggtcggtcggctccggatttgacctgccggataaagattgtccaaactgcagg
atcccctacaaaaaagacggacatgatattccgtttgaaacattccttgggtttaaaggg
gacaaagtgccggatatcgatttaaacttttccggtgagtatcagccgcgtgcgcataat
tacacgaaagagctgtttggtgaggattatgtattcagggccggcaccattggtacggta
gcggaaaaaaccgcctacggctatgtgaaaaagtatgctgaagaatatacgaagcaatac
cggagtgccgaagtagaccgtcttgtatccggatgtacgggcgttaagcgaacaaccgga
cagcatccaggcggtatcatcgttgtgccggattacatggatatatacgatttttcaccg
attcagtatccggctgactctgataaatcggagtggaaaacgacccattttgatttccat
tccattcacgataacctgcttaagctcgatattctcggtcacgacgatccaacggtaatc
cggatgcttcaggatttatcaggcatagatccaaaaacgattccgaccgatgatcctgaa
gtaatgaagattttcagcggcactgaatccctcggtgtaacggaagagcaaattatgtgt
aaaaccggtacacttggtattccggaatttggtacgcggttcgtccgccagatgcttgaa
gaaacaaaaccaactacattctcagagctcgttcaaatttccggtttgtctcacggaacg
gatgtatggctcggaaatgcgcaggagctgattcaaaaaggcatctgccagctgtctgac
gtaatcggctgccgggatgacattatggtctatttgatttatcaagggcttgaaccggct
tttgcttttaaaatcatggaatctgtccgtaaaggaaaagggctgacagaagaaatggaa
gaagaaatgcgcaaaaatgaagtgccggaatggtatattgattcatgtaaaaaaatcaaa
tacatgtttccgaaagcgcacgccgccgcttacgttttaatggctgtgcggatcgcgtac
tttaaagtacatttgccgcttctttactatgctgcttattttacggtccgggcggaagat
tttgatatcgatgtgatgtcaaagggctcgtctgcgatcaaagccctgcttcaggaaatt
aacgcaaaagggctggatgcatcaccgaaagagaaaaacttgatgacagttcttgagctg
gcacttgagatggtagagcgaggctttacgttcaaaaaagtggatttataccgttcaagc
gcagacgaatttgtcattgacggcaattctcttattccgccgtttaatgcgctgccgggt
cttgggacaaatgcggctaaaaatattgtggcgtcccgtgagcacggtgagtttttatcc
aaagaggatttacagcagcgcggcaaggtttcgaaaaccattatggaatatttggagaaa
atgggatgtctcgacgcgctgcccgaccaaaaccagctgtcactgttttga
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