Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016: RRU94_22870
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Entry
RRU94_22870 CDS
T09442
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dom
Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016
Pathway
dom03420
Nucleotide excision repair
dom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RRU94_22870 (pcrA)
03430 Mismatch repair
RRU94_22870 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dom03400
]
RRU94_22870 (pcrA)
Enzymes [BR:
dom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RRU94_22870 (pcrA)
DNA repair and recombination proteins [BR:
dom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RRU94_22870 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
RRU94_22870 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
ResIII
AAA_11
DUF5805
AAA_22
DEAD
Motif
Other DBs
NCBI-ProteinID:
WNS80321
UniProt:
A0AA96N6J5
LinkDB
All DBs
Position
2:complement(2890840..2893032)
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AA seq
730 aa
AA seq
DB search
MQFLTDRLLNGLNPQQQEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLIVEKEINPYNIL
ALTFTNKAAREMKDRIGALLGGAAEEIWMSTFHSMCVRILRRDIDRIGYSRNFTILDTAD
QLSVIKSILKDLNIDPKKFDPRALLGAISSSKNILVDAAAFARQQGGYMDKVTSDVYTEY
EKRLKKNNALDFDDLIMLTIRLFERVPEVLEFYQRKFQYIHVDEYQDTNKSQYTLVKQLA
SRFQNLCVVGDSDQSIYRWRGADIANILSFEKDYPHAKAIILEQNYRSTGRILQAANEVI
ENNSNRKPKKLWTENVDGKKIAYFRADSERTEAEFVAGKIKELSATGRKPSDFAVLYRTN
AQSRLIEETLMKSNIDYTIVGGIKFYDRKEIKDLLAYLRLIANPDDDISLSRVINVPKRG
LGSTSLDKIARYAQENDISMFRALAEVDFIGLSGKAANAAADFRDLIHAYTQQQEYLSVS
ELVEEVIDRTGYVDMLAAEKTIEAQTRIENIEEFLSVTKSFEESNEDKTLIAFLTDLALV
ADIDQLGKEEGPAESVVLMTLHSAKGLEFPVVFLIGLEEGVFPHSRSLMDDEEMEEERRL
AYVGITRAEEELYMTNAEMRTLYGKTNMNPVSRFISEIPEDLLESENPKRQPRKAMPFGQ
KTRPAVTRPQTSAAAGLEWRVGDKAAHKKWGTGTVVAVKGNGDSTELDIAFPSPTGIKRL
LAQFAPIEKI
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttttaacagatcgattattaaatggcttgaatccgcagcagcaggaagccgtt
aaaacaacagaagggccgctcctgattatggctggagcgggctcaggcaaaacccgggtg
ctgacacaccggattgcctatttaattgttgaaaaagaaatcaatccctataacattttg
gcgcttacgtttaccaataaagcggcgcgcgaaatgaaagaccgaattggtgcactgctc
ggcggtgcagctgaagaaatctggatgtcgacattccactccatgtgtgtgcgtatttta
cgccgggatattgaccggattggctacagccggaattttacaattttagatacagcagat
cagctttcggtcattaaaagcattttaaaagatttaaacattgatccaaaaaagtttgat
ccgcgggcgctgcttggcgcgatcagctcgtctaaaaacattttagtggatgcggcggcg
tttgcgcgccagcagggcggctatatggataaagtcacgtctgatgtgtacacggaatat
gaaaagcgcttaaagaaaaacaatgcgcttgattttgacgatttgattatgctgacgatc
cgcctgtttgagcgggtgccggaagtattggagttttatcagcgcaaatttcagtatatt
cacgtggatgagtatcaggatacgaataaatcgcagtacacccttgtgaagcagctggcg
agccgttttcaaaatttgtgcgtagtcggcgacagtgatcagagcatttatcgctggcgc
ggtgcggatattgcgaatattttatctttcgaaaaagattatccgcatgcaaaagcgatt
attcttgaacaaaactaccggtcaacaggacggattctacaggcagcgaatgaagtgatt
gaaaacaattccaaccgaaagccgaaaaagctttggactgaaaatgtggatgggaaaaaa
atcgcttatttccgggctgacagcgaacggacagaagctgaatttgtggccggtaaaata
aaagagctttccgccacgggaagaaagccgtctgattttgctgttttgtaccgcacaaat
gcccagtcgcgtttgattgaggaaacactgatgaagtcaaacattgactatacgatcgtc
ggcggtattaaattctatgatcggaaggaaattaaagacctgctcgcgtatttgcgcttg
attgcaaatccggatgatgatatcagcttgtcgcgtgtcattaatgtgccgaagaggggc
cttggttccacgtcacttgataaaattgcccgctacgcgcaggagaacgacatttccatg
tttagggctcttgcagaagtcgattttattggtttaagcggtaaagcggcgaatgcagca
gctgattttcgtgatctgattcatgcttatacgcagcagcaggaatacttatctgtctcc
gagcttgtagaagaagtgattgaccggaccgggtacgtggacatgcttgcagcggaaaaa
acaattgaagcgcagacacggatcgaaaatatcgaagagtttttatctgtcacaaagtct
tttgaagaatcaaacgaagacaaaacgcttattgcttttttaacagatctggcgcttgtt
gcggatatcgaccagctcggcaaagaagaagggccggcagaatccgtcgttcttatgacg
cttcattccgctaaagggcttgaattccccgttgtattcctgattggactggaagaaggc
gtctttcctcacagccgctcgcttatggatgatgaagaaatggaagaagaacgccgtctt
gcgtatgtcgggattacccgtgcggaagaagagctgtatatgaccaatgcagagatgcgg
acactatacggaaaaacaaacatgaatcctgtgtcgcgctttatcagcgaaattccagag
gatctgcttgaatcagagaatccgaaacgacagccgcgaaaagcgatgccgtttggccaa
aaaacacgtccggctgtaacacgcccgcaaacgagtgcggcggcagggctggagtggagg
gttggcgataaagcggcgcataaaaaatggggaacaggaaccgttgtggcggtaaaagga
aacggcgacagcacagagctggacattgcgtttccgagtccaaccggcattaagcggctt
cttgcacaattcgcaccgattgaaaagatataa
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