Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016: RRU94_23385
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Entry
RRU94_23385 CDS
T09442
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
dom
Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016
Pathway
dom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RRU94_23385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dom03019
]
RRU94_23385
03009 Ribosome biogenesis [BR:
dom03009
]
RRU94_23385
Enzymes [BR:
dom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RRU94_23385
Messenger RNA biogenesis [BR:
dom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RRU94_23385
Ribosome biogenesis [BR:
dom03009
]
Prokaryotic type
rRNA helicases
RRU94_23385
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
GRP
AAA_19
DeaD_dimer
Motif
Other DBs
NCBI-ProteinID:
WNS80405
LinkDB
All DBs
Position
2:complement(2981405..2982871)
Genome browser
AA seq
488 aa
AA seq
DB search
MTKFKDLNLSEATLKAIDKMGFEEATPIQSETIPLGLTGKDIIGQAQTGTGKTTAFGIPM
VEKIDTKNEAIQGLIIAPTRELAIQVSEELYRIGSGKRVRVLAVYGGQDIQRQIRALKQR
PHIIVGTPGRILDHINRRTLKLENLETLVLDEADEMLNMGFIQDIESILSNVPAERQTLL
FSATMPGPIRAIAERFMKDPEMIKVKAKEMTVSNIDQYYVKVPQREKFDVLARLMDSHSP
ELAIIFGRTKRRVDELANALSLRGYQAEGIHGDLTQAKRLTVLNRFKAGKIDVLVATDVA
ARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKEGMAITLVDPREMSYLREVERTTK
KRMNPMEAPSWDDALSGLQQAAVTELEEAIAKNEWAEYRSFAKEMLDQYGAEDVVAAALK
LITKEPDRTPVHITNEAALPQKRDKFRSKNSGGYRKSGGGGRQGGGRSYGNRDRKGGSGS
GRRKYSSN
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaaatttaaagatttaaatttaagcgaagcaacgctgaaagcaattgacaaaatg
ggctttgaagaggcgacgccaattcagtctgaaacgattcctttaggcttaactggaaaa
gacatcatcggacaggcacaaacaggaacgggtaaaacaacagcatttggtatcccgatg
gtggaaaaaattgacacgaaaaatgaagcaatccaagggttgattattgcaccgacacgc
gagcttgcgattcaggtttcagaagaactttatcgaatcggcagcggcaaacgtgtccgc
gtgctggctgtttatggcggacaggacattcaacgccaaattcgcgcgcttaaacaacgc
ccgcatattatcgttggaacaccgggacgtattctagaccatattaaccgccgtacatta
aaacttgaaaatcttgaaacgcttgtgcttgatgaagcagatgaaatgttgaacatgggc
tttattcaggacattgaatcaattctttcaaatgttcctgcagagcgccagacacttctt
ttctcagcaacaatgccgggaccaatccgggcgatcgctgaacgctttatgaaagatcca
gaaatgatcaaagtaaaagcgaaggaaatgacagtttctaacattgatcagtattacgtg
aaagtaccgcagcgtgaaaaattcgacgttcttgcccgtttgatggattctcattcacct
gagcttgcaatcatctttggccgtacaaagcgccgtgttgatgagttggcaaatgcactt
agcctgcgcggctaccaggcggaaggtattcatggtgacttgacacaagcaaagcgttta
acggtattaaaccgttttaaagcaggaaaaatcgatgtgctggtagcaacagacgttgcg
gcgcgcggtcttgatatttctggcgttacacacgtttataactatgatattccacaggac
cctgaaagctatgttcaccgtatcggccgtacaggacgtgctggtaaagaaggtatggcg
attacgctggttgacccgcgtgaaatgagctatcttcgtgaagtggaacgtacaacgaaa
aaacgcatgaacccaatggaagctccatcttgggatgatgcgcttagcggtctgcagcaa
gcggctgttacagagcttgaagaagcgattgctaaaaatgaatgggcagaatatcgctca
ttcgcaaaggaaatgcttgaccagtacggtgcagaagatgttgtagcggcggcattaaaa
cttatcacaaaagagccggaccgtacaccagttcatattacaaatgaagcggcacttcca
caaaaacgtgacaagttccgcagcaaaaactcaggcggataccgcaaatctggcggaggt
ggacgccagggcggcggacgctcttacggaaaccgtgaccgcaaaggcggatcaggcagc
gggcgccgtaaatattcatctaactaa
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