Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016: RRU94_25475
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Entry
RRU94_25475 CDS
T09442
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dom
Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016
Pathway
dom03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dom00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RRU94_25475 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dom03021
]
RRU94_25475 (rpoC)
03400 DNA repair and recombination proteins [BR:
dom03400
]
RRU94_25475 (rpoC)
Enzymes [BR:
dom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RRU94_25475 (rpoC)
Transcription machinery [BR:
dom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RRU94_25475 (rpoC)
DNA repair and recombination proteins [BR:
dom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RRU94_25475 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
WNS80762
UniProt:
A0AA96N804
LinkDB
All DBs
Position
2:complement(3364162..3367752)
Genome browser
AA seq
1196 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTKAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTESGDTALEKKQLLSEKEFRTYRDKYGSKFQASMGAEAIKKLLQ
DIDLDKETEQLKEELKSAQGQRRTRAIKRLEVIEAFRHSGNRPDWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVERGLAHNIKSAKRKIERVQSDVWDVLEEVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARMLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREGAVGEGAVFKDTNEAILAYQNGYVHLHTRVAVA
ASSLENQTFTEEQNKKLLVTTVGKLIFNEILPDTFPYINEPTSSNLEVKTPEKYFLDAGA
NVPEHIAKQEIVAPFKKKILGNIIAEVFKRFKITETSKMLDRMKDLGFRHSTKAGITVGV
ADIVVLGEKEGILKEAQAKVDNVMKQFRRGLITEEERYDRVISVWSAAKDVIQGKLMESL
DKRNPIFMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGLEISSIKDGTEIIEALE
ERLIGRYSRKAIKHPETGEVLVRENEQIDEDLAKVVVEAGVETVWIRSAFTCNTRHGVCK
KCYGRNLATGQEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAIISEINGTITSITEGRDRQQEITIAGDVETRTYNAPYTARLKVAVNDTIER
GQVLTEGSIDPKEYLKIKDVTSVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMLRKVRV
LEAGDTDVLPGSLLEIHQFRDANEKVLLEGGIPATGRPILLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMQRYRQSEANLKEEESVTVE
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
ttgctggatgtcaataattttgagtacatgaaaatcggtctcgcttcaccggataagatc
cgttcatggtcttatggagaagttaaaaaacctgaaactatcaactaccgtacgctgaag
ccagaaaaagacggcttattctgtgaacggatttttggtcctacgaaagactgggaatgt
cattgcggcaaatacaagcgtgttcgttataagggcgttgtgtgtgaccgttgtggcgtt
gaagtaacaaaagcgaaagtgcgccgtgagcgtatgggacacattgagctggctgcgcct
gtttcgcatatttggtatttcaaaggaattccaagccgtatgggtcttgttctggacatg
tctccacgtgcattggaagaagtcatttacttcgcatcttacgtagtaacagaatcagga
gatacagcgcttgagaaaaagcagcttctttctgaaaaagagttccgtacttaccgagat
aaatacggcagtaagttccaggcgtctatgggtgcagaagcgatcaaaaagcttcttcaa
gacattgatcttgataaagaaacagaacagttaaaagaagaattgaaatcagcgcaaggc
cagcgccgtacacgtgcgatcaagcgccttgaagtgattgaagcattccgtcattctggc
aaccgtccagactggatgattctagatgtgctgccggttatcccgccagaacttcgtcca
atggtacagctggatggcggccgctttgcgacgtctgatttgaatgacttgtaccgccgt
gtaattaaccggaacaaccgtcttaaacgcttgctagatcttggtgcgccgagcatcatt
gttcaaaacgaaaagcgtatgcttcaagaagcagtagacgcgttgatcgacaatggacgc
cgtggacgccctgttacaggaccgggtaaccgtccattaaaatctctttcacatatgctg
aaagggaaacagggccgtttccgtcaaaacttgcttggtaagcgggttgactactctggc
cgttctgtaatcgtcgttggtccgaacttgaaaatgtatcaatgcggccttccaaaagaa
atggcgcttgaacttttcaaaccgttcgttatgaaagaacttgttgagcgtggacttgcg
cacaacattaaaagtgcaaaacgtaaaattgaacgcgttcagtctgatgtgtgggatgtg
cttgaagaagtaatccgtgagcacccggttctcctaaaccgcgcaccgacgcttcaccgt
cttggtatccaggcatttgaaccaacattggtagaaggacgtgcgattcgccttcacccg
ctcgtatgtacagcatacaacgcagactttgatggtgaccaaatggctgttcacgtgccg
ctttcagcagaagcacaagcggaagcgcgtatgctcatgctggctgcacagaacattttg
aatccgaaagacggaaaaccagttgttacgccgtcacaggatatggtactcggtaactac
tacttaacgctcgagcgtgaaggagcagtaggggaaggggccgtctttaaagatacaaac
gaagcaattttggcttatcaaaatggatatgttcacctgcacacacgtgttgcggtggca
gcttcatctcttgaaaaccagaccttcacagaagaacaaaacaaaaagcttcttgttaca
acggttggtaaattgatctttaatgaaattttgccggatacattcccgtacattaacgaa
ccaacaagcagcaaccttgaagtgaaaacaccggagaaatatttcttagatgcgggtgca
aatgtgcctgagcacattgccaagcaggaaattgttgctccgtttaaaaagaaaattctt
ggtaacatcattgctgaagtattcaaacgcttcaagattactgaaacatctaaaatgctt
gaccgcatgaaagacctcggctttagacattcgacaaaagcgggtatcacagtaggggta
gcggatatcgttgtattgggtgaaaaagagggaattctaaaagaagcacaggcaaaagtg
gacaacgttatgaagcagttccgccgcggtttaattaccgaagaagagcgctatgaccgc
gttatttctgtctggagcgcagcgaaagatgttatccagggcaaattgatggaatccctt
gataaacgcaacccgatcttcatgatgagtgattccggagcccgtggtaacgcgtccaac
tttacacagcttgctggtatgcgcggactcatggccaacccggccggccggattatcgaa
cttccgatcaaatcttcgttccgtgaaggtctgacggtactcgagtactttatctcgaca
cacggtgcgcgtaaaggtcttgccgataccgccctgaaaacagccgattcaggttactta
acacgtcgtctcgttgacgtagcgcaggacgttatcgttcgtgaggatgattgtgggaca
gatcgcggcctggaaatcagctcgatcaaagacggcacggaaattatcgaggcacttgaa
gagcgtcttattggccgttattcacgtaaagcaatcaagcatccggaaacgggtgaagtg
cttgtccgtgaaaacgaacaaattgatgaagacttggcgaaagtggttgtggaagcaggc
gtggaaaccgtatggatccgctcagcattcacttgcaacacacgtcatggcgtatgtaaa
aaatgctacggacgcaacttggcaaccggccaggaagtggaagttggcgaagcagtcggt
attattgctgcccagtcaatcggagagccgggaacacagcttacaatgcgtacgttccac
acaggcggcgtagctggagacgatattacgcagggtcttccgcgtatccaggagattttc
gaagcgcgtaacccgaaaggtcaggcgatcatttcggaaatcaacggaaccattacgtct
attacagaaggccgtgaccgtcagcaggagatcactattgcaggcgacgtggaaacacgc
acatacaacgctccatatacagcacgcttaaaagtagccgtaaacgatacgatcgaacgc
ggtcaagtattaacagaagggtctatcgatccgaaagaatacttgaaaatcaaagatgtc
acatctgttcaggaatacttactgcgtgaagtgcagaaggtataccgtatgcagggggtt
gaaatcggcgataaacacgttgaagtaatggttcgccaaatgcttcgtaaagtacgtgtg
cttgaagcgggagatacagatgttcttccaggcagtctgcttgaaattcatcagttccgt
gatgccaatgaaaaagttcttcttgaaggcggaattccggcaacaggccgtccgatcctt
ttgggaattacaaaagcatccctcgaaacggattccttcttgtctgctgcatccttccag
gaaacaactcgtgtcctgaccgatgctgcgatcaaaggaaagcgcgacgaattgcttggc
ttgaaagagaacgttattatcggaaaactcgttccggcgggtactggtatgcagcgttat
cgtcaatccgaagcaaatctaaaagaagaagaatcagttacagtcgaataa
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