Marivivens sp. JLT3646: BSK21_00065
Help
Entry
BSK21_00065 CDS
T04589
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
don
Marivivens sp. JLT3646
Pathway
don03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
don00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSK21_00065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
don03019
]
BSK21_00065
03016 Transfer RNA biogenesis [BR:
don03016
]
BSK21_00065
Enzymes [BR:
don01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BSK21_00065
Messenger RNA biogenesis [BR:
don03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BSK21_00065
Transfer RNA biogenesis [BR:
don03016
]
Prokaryotic type
tRNA degradation factors
BSK21_00065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
APO85566
LinkDB
All DBs
Position
complement(10494..12632)
Genome browser
AA seq
712 aa
AA seq
DB search
MFNEVKKSIQWGEETLTLETGKIARQADGTVIATLGETSVMANVTFAKEQKPGQDFFPLT
VHYQEKYYAAGKVPGGFFKREARPTEKETLTARLIDRPIRPLFAPGFKNEVLLMCTVLSH
DLVNDPDIVAMIAASAALTISGAPFMGPIAGCRVGFVDGEYILNPEVDDMQNLRTNPEQR
LDLVVAGTKDAVMMVESEAYELTETEMLGAVNFAHQQIQPVIDLIIDLAEETAKEPFEFI
PPNYSDLYEVVKAAGEEKMRAAYAITDKQERVAAVAAAKDAIKATLTEEQLEDGNLGSAL
KKLESSVLRGSVVKEGKRIDGRALDQVRPIVCETGLLPRTHGSALFTRGETQGLVVTTLG
TGDDEQIIDALHGNFRSNFLLHYNFPPYSVGEVGRVGSPGRREIGHGKLAWRALQAVLPA
ATDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKAPVAGVAMGLVLEDDGSYA
VLTDILGDEDHLGDMDFKVAGTEAGITSLQMDIKVQGITPAIMEKALEQARQGRLHILGE
MSKALTSANEFSVHAPRIETMQIPTDKIREVIGSGGKVIREIVEVSGAKVDINDEGIIKI
ASANGEAIQKAYDMIYSIVAEPEEGKVYKGKVVKLVDFGAFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQEVWVKLLGFDDRGKVRLSMKVVDQETGEEAKVEEAAAEE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatgaagtgaaaaaatccatccagtggggcgaagaaacgctcactctggaaacc
ggcaagattgcccgtcaggccgacggcaccgtgattgccacccttggcgaaacttcggtc
atggcaaacgtgacctttgctaaggaacagaaaccgggtcaggacttcttccccctgacg
gttcactaccaagagaaatactatgccgccggtaaagttccgggcggtttctttaagcgc
gaagcgcgcccgaccgaaaaagaaacgctgactgcccgcctgatcgaccgtccgatccgc
ccgctgtttgcacctggcttcaaaaacgaagttctgctgatgtgcaccgtgctgagccac
gacctcgttaacgatccggatatcgttgcgatgatcgctgcttcggctgcactgaccatc
tctggcgcaccattcatgggcccgatcgctggttgccgtgttggctttgttgacggtgag
tacatcctcaaccctgaagttgacgatatgcaaaacctgcgcaccaacccagagcagcgc
ctcgatctggttgttgcaggcaccaaagacgccgtaatgatggttgaatccgaagcttac
gagctgaccgaaaccgaaatgcttggcgctgtgaactttgcacaccagcagatccagccg
gttatcgacctgatcattgatctggcagaagaaaccgcaaaagagccgttcgaattcatt
ccgccgaactactctgacctctacgaagttgtgaaagcagctggcgaagagaaaatgcgc
gctgcttatgcgatcaccgacaaacaggaacgcgttgctgctgttgctgctgcaaaagac
gcaatcaaagcgaccctgaccgaagaacaactcgaagacggcaacctcggctccgcgctg
aaaaagctcgaatcctcggttcttcgtggttcggttgttaaagaaggtaagcgcatcgac
ggtcgtgcactggatcaggttcgcccgatcgtttgtgaaactggcctgctgccgcgtacg
cacggttcggctctgttcacccgtggcgaaacccagggtctggttgttaccaccctcggc
accggcgacgacgagcagatcatcgacgctctgcacggcaacttccgttcgaacttcctg
ctgcactataacttccctccgtactcggtcggtgaagttggccgcgtaggttcgccgggt
cgtcgtgaaatcggtcacggtaaactggcatggcgtgcgcttcaggcagttctgccggca
gcgaccgacttcccgtataccatccgcgttgtatccgagatcactgaatcgaacggttcg
tcctccatggcatcggtctgtggtggctccctgtcgatgatggacgctggcgttccgctc
aaagcacctgttgccggcgttgcaatgggtctcgttctcgaagacgacggatcctacgct
gttctgaccgacatcctcggtgacgaagatcacctcggcgacatggacttcaaagtagcg
ggtaccgaagctggtatcacctcgctgcagatggacatcaaagttcagggcatcactccg
gcgatcatggagaaagcacttgagcaagcccgtcagggtcgtctccacatcctcggcgaa
atgagcaaagcgctgacctcggctaacgagttctcggttcacgctccgcgcatcgaaacc
atgcagatcccgaccgacaagatccgtgaagtgatcggttcgggcggtaaggtcatccgt
gaaatcgttgaagtgtcgggcgcaaaagtagacatcaacgacgaaggcatcatcaaaatc
gcatccgccaacggcgaagcgatccagaaagcctacgacatgatctactcgatcgttgca
gagccagaagaaggcaaagtctacaaaggcaaagttgtcaaactcgtcgactttggcgct
ttcgtgaacttctttggtaagcgtgacggtctggtgcacgtttcgcaaatcgaaaaccgt
cgcctgaaccacccatcggacgttctcaaagaaggtcaggaagtttgggtgaaactcctc
ggcttcgacgatcgcggcaaggttcgcctgtcgatgaaagttgtcgatcaggaaactggc
gaagaagcaaaagtcgaagaggctgccgccgaagaataa
DBGET
integrated database retrieval system
