Marivivens sp. JLT3646: BSK21_04205
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Entry
BSK21_04205 CDS
T04589
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
don
Marivivens sp. JLT3646
Pathway
don03420
Nucleotide excision repair
don03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
don00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BSK21_04205
03430 Mismatch repair
BSK21_04205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
don03400
]
BSK21_04205
Enzymes [BR:
don01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BSK21_04205
DNA repair and recombination proteins [BR:
don03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BSK21_04205
MMR (mismatch excision repair)
Other MMR factors
BSK21_04205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
CarD_TRCF_RID
DEAD
Motif
Other DBs
NCBI-ProteinID:
APO86313
UniProt:
A0AA34SDM5
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All DBs
Position
834352..836793
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AA seq
813 aa
AA seq
DB search
MSSYSDDDAFEAAEMSLSQRAMMASRPTPYLDDLNPAQREAVEALDGPVLMLAGAGTGKT
KALTTRIVHLLATGKARPNEILSVTFTNKAAREMKERVGRLLGEAVEGMPWMGTFHSVCV
KLLRRHAELIGMDDRNALIEGRPSLHLKSNFTILDTDDQIRLLKQLIEANNIDAKRWPPR
MLAGIIDSWKNRAWTPDKVPTREAAAFDGKAIDLYDQYQRRLLELNAVDFGDLLLHMVTI
FQTHQDVLDQYQRWFRYVMVDEYQDTNVAQYLWLRLLAGGHKNICCVGDDDQSIYGWRGA
EVGNILKFEKDFPGAKVVRLEQNYRSTPHILAAASGVIAGNKGRLGKTLWTDREEGERVR
LIGHWDGEEEARWIGEEIEAMQRGTRGMAPRSLDDMSILVRASHQMRAFEDRFLTIGLPY
RVIGGPRFYERLEIRDAMAYFRLAVSQDDDLAFERIVNTPKRGLGDKAIQTIQRMARDNG
VNLVEGARLCVDTGAIKGKGGAALGQLVQGLDRWYQQLRDEADTHIEVAEMILDESGYTT
MWMNDKTPEAPGRLENLKELVKALENFDNLQGFLEHIALIMDNDSEDAEEKVSIMTLHAA
KGLEFPAVFLPGWEDGLFPSQRSMDESGLKGLEEERRLAYVGITRAEEVCTISFAANRRV
YGQWQSQLPSRFIDELPVDHVEILTPPGLYGGGYGAAGMSSSASPAYAMKAASTIEERVG
KADVYNSPGWKRMQSRSQNRGMAQPSEVRGLTIDATAVSSFTIGDRVFHQKFGYGEVMEI
EGDKLDIEFDKAGSKKVVAKFIVSAAQANDVPF
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctattccgatgatgacgcctttgaggcggccgaaatgtccttgtcccagcgc
gctatgatggcgtcgcggcccacgccctatctggatgatcttaatccagcgcagcgagag
gcagtcgaggcattagatggccccgttttgatgttggctggcgccggaacgggcaagacc
aaggcgctgaccacgcggattgttcacctgctcgccacgggcaaggcgcgtcccaatgaa
atcctttcggtgacgttcaccaacaaagctgcgcgcgagatgaaagagcgtgttggccgt
ttgttgggcgaagcggtcgagggcatgccgtggatgggcaccttccactcggtctgtgtc
aaactcttgcgccgtcacgccgaactgatcgggatggacgaccgcaacgctctgatcgaa
gggcgcccttcgctgcacctgaaatcgaattttacgatcctcgatactgacgatcagatc
cgcctgctcaagcagttgatcgaggcgaataacatcgacgccaaacgctggccgccacgg
atgctggcgggaatcattgatagctggaaaaaccgtgcatggacgcccgacaaggttccg
acccgcgaggccgctgcctttgatggcaaggcgattgacctctacgatcagtaccagcgt
cgtttgctagagctgaacgccgtcgatttcggtgacctcctgttgcacatggtcacgatt
ttccagacccatcaggacgtgctggatcaataccaacgctggttccgctatgtgatggtg
gacgaatatcaggacaccaacgtcgcccagtatctttggttgcgcctccttgccggtggt
cacaaaaacatctgctgcgtgggtgatgacgaccagtcgatctatggctggcgcggggcc
gaggttggcaacatcctcaagttcgaaaaggatttccccggggccaaggtcgttcggctg
gagcaaaactaccgctctactccgcatatccttgccgccgcatctggggtgattgcaggc
aacaaggggcgtttgggtaaaacgctctggaccgaccgagaagaaggcgagcgtgtccgt
ctgatcggacattgggatggcgaagaagaggcccgttggatcggcgaagagattgaggcg
atgcagcgcgggactcgcggaatggccccgcgttcgctcgacgatatgtcgatcctcgtg
cgggcatcgcatcagatgcgcgcgtttgaggaccgtttcctgaccatcggcctgccgtat
cgcgtcatcggtggcccccgtttctacgagcgtttggaaatccgcgatgcgatggcctat
ttccgtctcgccgtttcgcaggatgacgacctcgcgttcgagcggattgtgaacacaccg
aaacgtggtctgggtgacaaggcgatccaaacaattcagcgcatggcgcgggataacggc
gtgaaccttgttgagggcgcgcggctttgtgtcgacactggcgcgatcaaaggcaagggc
ggcgcggcgttgggccagttggttcaggggctcgatcgttggtatcagcagttacgggac
gaggcggatacccacatcgaagtggctgagatgatcctcgacgaatctggctacaccaca
atgtggatgaacgacaaaacgccagaggcgccggggcggctagagaaccttaaggaattg
gtcaaagcgctcgagaattttgataaccttcaagggtttctcgaacatatcgcgctgatc
atggacaacgattccgaggatgctgaggaaaaggtcagcatcatgacgctgcacgcagca
aaagggttggaattccctgccgtgttccttccagggtgggaggatggcctgtttccgtct
cagcgcagcatggatgaaagcgggctgaaggggttggaagaggagcgccgtcttgcttat
gtcggcatcacccgtgccgaagaggtctgcacgatttcctttgccgcgaaccgtcgggtc
tatggtcagtggcagagccagcttcctagccgtttcatcgacgaattgcctgttgatcac
gtggaaattctgacgcctccggggctttatggtgggggctatggcgccgctggcatgtcg
tcgagcgcgtcgcctgcctatgcgatgaaagccgcatcaaccatagaggaacgcgtcggt
aaggccgacgtttacaactctcccggttggaagcggatgcaatcccgcagtcaaaaccgt
ggcatggctcagccgtccgaggtgcgtgggttgaccatcgatgcgaccgctgtgtcgtcc
ttcaccattggcgatcgcgtgttccatcagaaattcggatatggcgaagtgatggagatt
gagggcgataagctggatatcgaattcgataaggcgggttcaaagaaggtcgtggcgaaa
tttatcgtctctgcggcgcaggcaaacgacgttccattttag
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