Marivivens sp. JLT3646: BSK21_11140
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Entry
BSK21_11140 CDS
T04589
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
don
Marivivens sp. JLT3646
Pathway
don03030
DNA replication
don03430
Mismatch repair
don03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
don00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSK21_11140
03430 Mismatch repair
BSK21_11140
03440 Homologous recombination
BSK21_11140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
don03032
]
BSK21_11140
03400 DNA repair and recombination proteins [BR:
don03400
]
BSK21_11140
Enzymes [BR:
don01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BSK21_11140
DNA replication proteins [BR:
don03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BSK21_11140
DNA repair and recombination proteins [BR:
don03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BSK21_11140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
APO87536
UniProt:
A0AA34X1E8
LinkDB
All DBs
Position
complement(2234010..2237510)
Genome browser
AA seq
1166 aa
AA seq
DB search
MTSQPRFIHLRVHTEYSLLEGAVRVKKLSGMAADMNMPAVAVTDTNNMFCALEFSEYASG
AGIQPIIGCQVDLAYTTPEPGKRPDDPAPIVLLAQSERGYENLMKLNSVLYVDAGGRLPQ
VEVADLERYSEGLICLSGGPDGPIGRLLRAGQRGKAEALLSQMKGIYPDRLYVELQRHPQ
EDGLPEAEQLSERGHIEMAYAMELPLVATNDVYFPKPDIYEAHDALICIAQGAYVDQAEP
RRRLTPQHYFKSPEEMATLFADLPEALENTVEIAKRCAFKAYKRNPILPKFADDEVVELR
RQANEGLQARLAVIPHAVTVEEYQARLDFELDIIEGMGFPGYFLIVADFIKWSKDNGIPV
GPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREETIRYV
QQKYGRDKVGQIITFGALLSKAAVRDVGRVLQMPYGQVDRLSKMIPVEGVKPVSIEQALI
QEERLREEARNEEVVDRLLTYGTKIEGLLRNASTHAAGVVIGDRPLDALVPLYQDPRSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVIQSAMDLIFKSGRPLHVAADGTQLYEPAEGAE
NEINAIPLEDEKTYKLYSAAKTVAVFQVESTGMMDALKRMKPTCIEDIVALVALYRPGPM
ENIPVYCDVKHGRKELESIHPTIDHILAETQGIIVYQEQVMQIAQVMAGYSLGGADLLRR
AMGKKIKEAMDAERPKFEEGAAKNGVDKKKASEVFDLLEKFANYGFNKSHAAAYAVVSYQ
TAWLKANHPVEFMAGVMNCDIHLTDKLSIYFQEVKKGLGIDYIPPCVNRSLATFDVVDQK
LVYALGALKNVGADAMRLVVEGRGEKPFATLFDFARRCDLKRIGKRPLEMLARAGAFDQL
DSNRKRVFDSLEALVGYSAAIQDQKTSNQVSLFGEAGDDLPEPRLANTPDWLPAVRLAEE
YKAIGFYLSGHPLDDYMTALKRNQVLSLDDVMAKAEHGACVVKMAGHVAGRQERKSARGN
RFAFAQLSDPTGAYEVTIFSDTLDVCRDHLETGNKVVLTVEATMESDQLKLLARSIVPID
TVVSDLTSSALRVYVNEPQAVSAISTVLEGAKTQKLRGARGPVILTLMTSGDLAEIDIDL
SEDFPINPEIKGALRSLDGVMDVVEA
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgaccagccagccacgattcatccatcttcgcgttcacacggaatattcgctccttgaa
ggggcggtgcgggtaaagaaattgtcgggcatggcggcggatatgaacatgcctgcggtc
gctgtgacagatacgaataacatgttctgcgcattggagttttccgaatacgcaagcggg
gcgggtatccagccgattatcggctgtcaggtcgatttggcgtataccacgcccgaaccg
gggaagcgtcccgatgatccagcgccgattgtgctactggcccagtcagagcgcggctat
gagaacctgatgaagctgaacagcgttctttatgtggacgctggtgggcggttgccgcag
gtcgaggttgcggaccttgaacggtattccgaagggctgatttgtttgtctggtgggccc
gatggtccgattggtcgtctgttgcgggcgggacaacgtggcaaggccgaggcgctgctg
tcgcaaatgaaagggatttaccctgatcggctgtatgtcgaacttcagcgccacccccaa
gaggacggcctacctgaagcagagcaattgtcagagcgcggtcacattgagatggcctat
gcgatggaattgccgctcgttgcgaccaacgatgtctatttccctaagcccgatatttac
gaggcgcatgatgcgctgatctgtatcgcgcagggggcctatgttgatcaggccgaacca
cgtcggcggttgaccccgcagcactatttcaaatcgcccgaagagatggcgacactcttt
gccgatcttcccgaggcgctggaaaatacggttgagattgcaaaacgttgtgcattcaag
gcttataagcgtaacccgattttgccgaagtttgcggatgatgaggtcgttgaacttcgt
cgtcaggccaacgagggtttgcaggcaagactggcggttattcctcatgcggttacggtc
gaggaatatcaggcgcggctcgatttcgagttggatattatcgaggggatggggttccct
ggctacttcctaattgttgcggactttatcaagtggtccaaggataacggcatccctgtc
ggaccgggccgtggttcgggtgcgggctctctcgtggcttatgcgctgacgattaccgac
cttgatccgctgcggtatagccttctgttcgaacgcttcctcaaccccgaacgtgtctcg
atgcctgacttcgacatcgacttctgcatggatcgacgcgaagaaacgatccgctatgtg
cagcagaaatacggtcgtgacaaagtgggtcagatcatcacgtttggtgcgcttttgtcc
aaggctgcggtgcgtgacgttgggcgggtattgcagatgccttatggacaggtggatcgt
ctgtccaagatgatccctgtcgagggtgtgaaacctgtcagcattgaacaggccctgatc
caagaggaacgtctgcgcgaagaggcccgcaacgaagaggtcgttgatcggcttttgacc
tacggaaccaagattgaaggcctgttgcgcaacgcatcgacccacgcggcgggtgtcgtg
atcggggaccgtccgttggatgccttggtgccgctctatcaggatccgcggtctgacatg
cccgcgacccagttcaatatgaaatgggttgaacaggcgggtctcgtaaagttcgacttc
ttgggtctaaagaccctgaccgtcattcagtccgcgatggatttgatctttaaatcgggt
cgcccgctgcacgtcgcagcggatggcacgcagctctatgaacctgccgaaggggcagag
aacgagatcaacgccatcccgcttgaggatgaaaagacctacaagctctattcggcggcg
aaaacggtcgcggtgttccaggtggaatccacgggcatgatggacgccctgaaacggatg
aagccgacctgtattgaggacatcgtggcgcttgttgcgctctaccgtccgggtccgatg
gagaacatccctgtctattgcgatgtgaaacacggtcgcaaagaactggaatcgatacac
ccgactatcgaccacatcctcgccgaaacgcagggcattatcgtctatcaggaacaggtg
atgcagatcgcacaggtcatggcgggttactcgcttggtggtgcggacttgcttcgccgc
gcgatgggtaaaaagatcaaagaggcgatggacgccgaacgcccgaaattcgaagagggc
gcggccaagaacggtgtcgataaaaagaaggcatcggaggttttcgaccttctcgaaaaa
ttcgcgaactacggctttaacaaatcccacgcggcggcctatgcggtggtgtcttatcag
acagcatggctcaaggcgaaccatcccgtcgagtttatggccggtgtgatgaactgcgat
attcacctgaccgacaagctgtcgatctatttccaagaggtgaaaaaggggcttgggatc
gactacatcccgccctgtgtgaatcgcagtctcgcgacgttcgacgttgtcgatcaaaag
ctcgtctatgcgctgggcgcgttgaaaaacgtgggcgctgatgcgatgcggttggtggtt
gagggtcgcggtgaaaaaccctttgcgacgctgtttgatttcgcgcggcggtgtgacctg
aaacggatcgggaaacgtccgctcgaaatgctcgcacgggcaggggcgttcgatcagtta
gacagcaaccgcaagcgggtctttgacagtctagaggcgttggtcggctattcggcggct
attcaggatcagaagacatcgaaccaagtgtcgctctttggcgaggcaggtgatgatctg
ccagagccgcgattggcaaatacgcccgactggttgcctgcggtacgactggccgaggaa
tataaggcgattggtttctatctgtcaggtcacccgctggatgattacatgacggcgctg
aaacgcaatcaggttttatcgctcgacgacgtgatggcgaaagctgaacatggcgcctgc
gttgtcaaaatggcaggccacgtggcagggcgtcaggaacgcaaatccgcgcggggcaat
cgttttgcttttgcgcagttgtctgatccgacaggggcctacgaggtcacgattttctcg
gacacgttggatgtgtgccgcgatcatctggagacgggcaacaaggttgttctgacagtc
gaagcgacgatggaatccgatcaactgaagctcttggcgcggtcgattgtgccgattgat
acggttgtctctgatctgacgtcgtcggcattgcgggtctacgtgaatgaaccgcaggcc
gtttcggcgatttctaccgtgcttgagggtgcaaaaacgcagaaattgcgcggtgctcgt
gggcctgtgatcctgacattgatgacctcgggcgaccttgctgagatcgacatcgacctg
agcgaagatttcccgatcaaccccgagatcaaaggcgccttgcggtccttggatggggtc
atggatgtggtcgaggcctag
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