Marivivens sp. JLT3646: BSK21_11880
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Entry
BSK21_11880 CDS
T04589
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
don
Marivivens sp. JLT3646
Brite
KEGG Orthology (KO) [BR:
don00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
don03032
]
BSK21_11880
03400 DNA repair and recombination proteins [BR:
don03400
]
BSK21_11880
Enzymes [BR:
don01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BSK21_11880
DNA replication proteins [BR:
don03032
]
Prokaryotic type
DNA Topoisomerases
BSK21_11880
DNA repair and recombination proteins [BR:
don03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BSK21_11880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
HC2
Motif
Other DBs
NCBI-ProteinID:
APO87665
LinkDB
All DBs
Position
complement(2385357..2387945)
Genome browser
AA seq
862 aa
AA seq
DB search
MPVVVVESPAKAKTINKYLGSDYTVLASYGHVRDLPPKDGSVDTDSNFEMKWEVANDSKK
HVKAIADALKDDDVLILATDPDREGEAISWHLQETLTTRRAIKKSTTVSRVTFNAITKNA
VTEAMKNPRQVDTHLVEAYLARRALDYLVGFNLSPVLWRKLPGSKSAGRVQSVCLRLIVE
REMEIEAFNPQEYWTVKAVLANPRGQQFEARLTSFAGKKLDKFDISTAAQAELAAAAISS
RDLTVQSVEAKPANRNPSPPFMTSTLQQEASRKFGMGARQAMSAAQRLYEAGLITYMRTD
GIDMAPEAVMAARDAIREKFGEKYLPSSPRMYKNKAKNAQEAHECIRPTDMFMSPEKVKI
SDADQQKLYDLIYKRTIASQMAAAQMERTTVDIASADGQVVLRATGQVVLFEGFIAVYEE
GRDDSVVDDDDKRLPLLAAGDKTDKKEVLPEQHFTQPPPRYTEATLVKKMEELGIGRPST
YASIVTTIQDRDYVTKDKGRLIPQDKGRLVTVFLSNYFKKYVEYDFTASLENELDEVSAG
EVDYHDLLRRFWKDFSAAIAETSELRITEVLDKINEVLEPHLFPAKEDGSDPRACPNCGA
GRLSMRTARSGGAFIGCSNYPECRFTRPFGPPGMEQTGIGPDGKLLGHDDGDPISLRDGR
YGPYVQRGEASEDFPKPPRASLPKGWTTDTIDLDKALMLLNLPREIGPHPEDGVVVEAGI
GRFGPFVKHGTTYANLKEVDEVFDIGMNRAVEVLALKKAGRGGREAAKPLKELGDHPDGG
AMAVMSGRYGPYIKWDKVNATLPKDVDPETVTVEQAIELVNEKAAKSGKKRKAPAKKAAA
KKPAAKKATAKKAPAKKAASDE
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgccagttgttgttgtcgaatccccggctaaagccaagacaatcaacaaatatcttgga
tcggactacacggttttggcatcctacggtcacgtccgcgacttgcctccgaaagacggc
tctgtcgataccgactccaattttgagatgaaatgggaagtcgcgaatgacagcaaaaag
cacgttaaggcgattgctgacgcgctcaaggacgacgacgttcttatcctcgcaaccgac
cctgatcgcgaaggcgaagcgatcagctggcacttgcaagagaccctgaccacgcgtcgc
gcgatcaagaaatcgacaacggttagccgcgtgacattcaacgcgatcaccaagaacgcc
gtgacggaggctatgaaaaacccgcgtcaggtcgacacccatctggttgaggcgtatctg
gcccgccgtgcgctggactacctcgttggatttaacctttcgcctgttctgtggcgcaag
ctccccggttctaaatcggcaggccgcgtgcagtccgtttgtctgcgactgatcgttgaa
cgcgagatggagattgaggcgttcaatcctcaagaatattggaccgtgaaggctgttctc
gcgaacccacgcggtcagcagtttgaggcgcgtctgacatcgttcgcaggcaaaaagctc
gataaatttgatatttcgacggcagcgcaggctgaactagctgccgctgcgatttcgagc
cgtgatttgacggttcagtcagttgaggcaaagcccgccaaccgtaacccatccccgccg
ttcatgacctcgacgcttcaacaagaagcatcacgcaagttcggcatgggtgctcgccaa
gcgatgagcgcggcccagcgtttgtatgaagcgggtctgatcacctacatgcgtaccgac
ggcatcgacatggcgcccgaggcagtcatggcggcgcgtgacgcgatcagggaaaagttc
ggcgaaaaatacctgccgtccagcccgcgcatgtacaaaaacaaggcgaagaatgcgcag
gaagcgcacgagtgtattcgtccgacagatatgtttatgtcgcccgaaaaggtcaaaatc
tcggacgctgatcagcaaaaactctacgatctgatctataaacgcaccatcgcgagccag
atggcagctgcgcaaatggaacgcaccacggtcgatatcgcatcggctgacggtcaggtt
gtcttgcgtgccacgggtcaggtcgttctgtttgaaggcttcatcgcggtttacgaagaa
ggccgcgacgatagcgttgtggatgacgacgataaacgtctgccgctcctcgctgctggc
gacaagaccgacaagaaagaggttctgccagagcagcacttcacccagccgccgccgcgt
tacaccgaggcgactttggtcaaaaagatggaagagctgggcatcggtcgcccgtccacc
tatgcctctatcgtgaccacgattcaggaccgcgattatgtgaccaaggataaaggtcgc
ctgatcccgcaggacaaaggccgtttggtcactgtcttcctgtcgaactacttcaaaaag
tatgtggagtatgacttcacggcgagccttgagaacgaacttgatgaagtgtcggcgggt
gaggtggattaccacgacctgctgagacggttctggaaggatttctcggcggcgattgca
gaaacgtctgaactccggatcactgaggttctcgacaagatcaacgaagttctcgaaccg
catcttttccccgccaaagaggacggcagcgatccgcgtgcttgtccgaactgtggcgct
gggcgtttgtccatgcggacggcgcgctctggtggtgcgttcatcggttgttcgaattat
cccgaatgccgctttacccgtccgttcggccctccggggatggaacaaacgggtatcggt
ccagacggcaaacttctgggtcacgatgatggcgatccaatctcgctccgcgatggtcgc
tatggtccctatgttcaacgtggcgaagcgtctgaggatttcccaaaacctccacgtgca
agcctgcctaaaggttggacgacagacactatcgaccttgataaggcgctgatgcttctg
aacctgccgcgcgaaatcggcccgcaccccgaagatggcgttgtggtcgaggcgggcatc
ggtcgctttggtccgtttgtgaaacacggcacgacctatgcgaacctcaaagaggtggat
gaggtctttgacatcggtatgaaccgcgccgtcgaagtgctcgccctgaaaaaggcaggt
cgtggtggacgtgaggccgcgaaaccgctcaaggaactgggtgatcaccctgatggcggc
gcgatggcggtcatgtcgggtcgatatggtccctacatcaaatgggataaggtcaacgcg
acgctgcccaaagacgtagacccagagacggtgacggtcgaacaagcgattgagctggtg
aacgaaaaagccgcgaagtcgggaaagaaacgcaaggcccccgcgaaaaaggctgcagcg
aaaaagcccgccgccaagaaggccacagcgaaaaaagcgccagcgaaaaaagcagctagc
gacgaatga
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