Desulfosporosinus orientis: Desor_0180
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Entry
Desor_0180 CDS
T01675
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
dor
Desulfosporosinus orientis
Brite
KEGG Orthology (KO) [BR:
dor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dor03400
]
Desor_0180
DNA repair and recombination proteins [BR:
dor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Desor_0180
Archaeal homologous recombinant proteins
Desor_0180
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
EF-hand_7
Motif
Other DBs
NCBI-ProteinID:
AET65899
UniProt:
G7W7I0
LinkDB
All DBs
Position
171645..172934
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AA seq
429 aa
AA seq
DB search
MRILHTSDWHLGRTLEGRSRLEEQVMFINELCGIVEDEAVDLVLIAGDVFDTVNPPAMAE
ELFYDALNRLSDGGKRAIVAIAGNHDNPERLCAASPLAERNGITLYGLPKEVLRPSSSLL
IHPNQGKVSRVAAGQGWAELHIPSCPDPAIVAMLPYPSESRLNEVLSQSLDEEILREEYS
KRVQQLFSSFGQHFRSDAVNIGLSHLFVRGGMESESERPIQLGSAPTVEVNAMPTGAQYI
ALGHLHRAQTVKGAAVPTRYSGSPLAYSFSETGYAKSVVLVEAFPGQAITTREIFLRAGY
PLVKWKATEGLTQVQRWINEGKDLNAWIDLEIFVTSAIQSQDIHNLRRQREHLINIRPIF
PETEKIVAEARSKLPIDELFRKFYQDRTGGADPDQELVSMFLSLIDPDKDETVSISQRQI
IGDEEAETA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgcggattttacatacatcggattggcacttggggcgtactctcgagggtcggagccgg
cttgaggaacaggttatgtttattaatgagctgtgcgggattgtggaagatgaagccgtg
gatctggtcttgattgccggggatgtctttgatacagtcaatcctcctgccatggctgaa
gaacttttttatgatgcactcaatcgattgtccgatgggggaaagcgggcaattgtagca
attgccgggaatcacgataaccctgagcggctttgtgctgccagtccccttgcggaacgg
aatggaattacattgtatggcttgcccaaagaggttttgaggccaagttcaagtctctta
atccatccaaatcaaggaaaggtgagcagagttgcagcaggccaagggtgggccgagtta
catattcctagttgcccggacccggccattgtggccatgttgccttacccttcagaatca
cggcttaatgaggtattaagtcaaagcttagatgaggaaatccttcgagaagaatactcc
aaacgagttcagcaattattttcatcgtttggtcagcattttcgttctgatgcggttaac
attggccttagtcatctctttgtacggggagggatggagtccgagtcagagcgtccgatt
caacttggaagcgcgccaaccgtcgaagtaaatgcaatgccaacaggtgcgcaatacatt
gctcttgggcacttgcaccgtgctcagactgtcaagggggcggcggtcccgactcgttac
tctggttcgcctctcgcatatagcttctctgaaactgggtatgccaaatctgtggttctt
gttgaagcttttcccggacaagcaataacgacccgggaaattttcctcagggctggttat
cctctcgttaaatggaaagctactgagggattgactcaggtgcagaggtggatcaatgaa
ggcaaggatcttaatgcttggattgatctagagatttttgtgacgagtgcaattcagtcc
caagatatccataatctacgccgtcagagggaacacctcattaatattcgtcccattttt
ccggaaaccgagaaaatcgttgcagaggctcgctcgaaattacctattgatgagcttttt
cgtaagttttaccaggatagaaccggcggcgcagatccggatcaagaattggtctctatg
tttttatccttgattgacccagacaaagatgagaccgtctcgatttctcaaagacaaatt
ataggggacgaggaggctgagacagcgtga
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